Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g0490 | ATGGATTTGGACGATTTCCGATCCATATTGGAGACTGCGGGCGTCGACGTGTGGTTGTTCATCGACACCGCAATCACCGTCGCGTCCTTGGATTACGCCGCCGAATTGAAACACCGCCGAGATGGAATCGTCGAGCGCCTATACGCCGCCACGACGGCTCCTCCGCGATGCCGGAATTGCGAAGGTAACAATCGCCTCATGTCCAACGGTCACCAAGTGAAGAAACAGAGCAGCCCTAGCCCTAGCCCTGAACGACAACGACACCAGCCCCGTGGCAATTCCTCTCCCGCAACGCCGCAGTCTCTGGAAAATGACAAAGACAACGGCGACGACGACGATGAAGAGGTAGATCCTTACGGTGGTTTGTTCGATGACGAGCAGAAGAAGATTCTAGAGATTAAAGAGCAACTCGAAGCTCCTGACCAGTCCGAAGATTCGTTGGTAGAGTTGCTACAAAATCTTGCGGATATGGATATTACATTTCAAGCGTTAAAGGAGACTGACATCGGGAGGCACGTGAATCGGTTGCGGAAGCATCCTTCCAATGACGTTCGGCGATTGGTGAAGCTCCTTGTCAGGAAGTGGAAGGAAATTGTGGATGAATGGGTGAAGTTGAATCCACAGGGAAGAACCAACACTCTCATGGCTGATGGAGACTCGCCTCTGCTGAAAACCAGCCAAAATGGGCATCATCAGATTCCTGATTTTGCATACTCGCCAAATCCACACAATGGGAGCTCTGGGTCAGACCGTAACAACTCATCAGAAGCAGAACACAAACCAAAAGTAATTCCCCGCAGTGAAGCTCCGCCAAAACCCACGCCATCACCATCAGTTTCCACCCCTGCTTTCGCCTCTCAAAATAGACAGAGGGAACACAGAGAGAGCAATTTTGACGCGGAGAGACTTGCTTCTGCCAGAAGACGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCCAAAAGGCAAAGAACGATTCAGGTGATGGACATCCATGAGTTACCGAAATCAAAACCCAAGAATGCCTTCTTTGGAAAGAATAAAGGTGGCGGTAGTTCTCAGGGAAGGCACTGGTGA | 1077 | 0.5051 | MDLDDFRSILETAGVDVWLFIDTAITVASLDYAAELKHRRDGIVERLYAATTAPPRCRNCEGNNRLMSNGHQVKKQSSPSPSPERQRHQPRGNSSPATPQSLENDKDNGDDDDEEVDPYGGLFDDEQKKILEIKEQLEAPDQSEDSLVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLNPQGRTNTLMADGDSPLLKTSQNGHHQIPDFAYSPNPHNGSSGSDRNNSSEAEHKPKVIPRSEAPPKPTPSPSVSTPAFASQNRQREHRESNFDAERLASARRRLQENYKEAENAKRQRTIQVMDIHELPKSKPKNAFFGKNKGGGSSQGRHW* | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g0490 | 358 | ProSiteProfiles | TFIIS N-terminal domain profile. | 125 | 202 | IPR017923 | - | |
Apr1g0490 | 358 | Pfam | TFIIS helical bundle-like domain | 150 | 199 | IPR017923 | - | |
Apr1g0490 | 358 | MobiDBLite | consensus disorder prediction | 59 | 121 | - | - | |
Apr1g0490 | 358 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED | 1 | 358 | IPR044790 | - | |
Apr1g0490 | 358 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 128 | 209 | IPR035441 | - | |
Apr1g0490 | 358 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 124 | 212 | IPR035441 | - | |
Apr1g0490 | 358 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED | 1 | 358 | - | - | |
Apr1g0490 | 358 | Coils | Coil | 300 | 327 | - | - | |
Apr1g0490 | 358 | MobiDBLite | consensus disorder prediction | 210 | 252 | - | - | |
Apr1g0490 | 358 | MobiDBLite | consensus disorder prediction | 106 | 120 | - | - | |
Apr1g0490 | 358 | SMART | TFS2_5 | 130 | 201 | IPR003617 | GO:0005634 | |
Apr1g0490 | 358 | MobiDBLite | consensus disorder prediction | 62 | 103 | - | - | |
Apr1g0490 | 358 | MobiDBLite | consensus disorder prediction | 210 | 301 | - | - | |
Apr1g0490 | 358 | MobiDBLite | consensus disorder prediction | 332 | 358 | - | - | |
Apr1g0490 | 358 | CDD | TFIIS_I | 127 | 200 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g0490 | Apr-Chr1 | 5986372 | 5989976 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Apr1g0490 | Med26 | 1.4e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g0490 | - | - | aip:107622503 | 523.472 |