Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0488 ATGGGTGAACTAAAGCCATATTTGGCAATGTTTCTGATACAATTAATATATTCCGGATTGACCTTGTTTTCCAAGGCCGCGTTTAACGAGGGAATAAACGTACACGTGTTTGTCTTTTATAGACAACTCACTGGAGCCGTTATTTTGGTCCCTCTGGCCTTGATACTTGAAAGGTATATAGCAGTGCCATTTTCATTCATTATCTTCTGCAAGATTTTTATGTTTTCATTTTTTGGACTCACTCTTACTCTAAATATGCAAGCTGTTGGCCTTGTTTACACATCTGCTACGTTGGCCGCTGCATTTAATAATACCCTTCCCGCATCTACGTTCTTCTTTGCTGTGCTGCTCAGAATGGAGAGGGTAAATATAAGGACAATATCTGGAATTACAAAGATAGGAAGTGTATTACTGTGCATGGTTGGTGTAGCGACTCTAGCATTTTACAAGGGACCTCAGTTAGGGACTGTGCATCACAGGCTATCTGGATCCCACAATCACAACAGTCAACAACATGAAGATCATTTTTCATCTCGCACCAGATGGATATTGGGTTCTTTTCTCCTGTTCTTAGCTATGATTATGTGGAGTTTTTGGCTTATAATTCAGGCTCAATTTCTTAAAAGCTACCCTTCAAAATTGATGTTCACGAGCGTTCAATGCCTATCAAGTTCAATTCAGTCATTTGGTGTTGCTATAGCTTTTGAAAGAGATATCCAGCAGTGGAAGTTGGGTTGGAACATAGAACTGCTTGCAGTTGTTTACTGTGGGACACTCGTGACCGCGGTGGCCTACTACATGCAAGCTTGGGTGATTGAAAAGAAAGGACCAGTTTTTATAGCAATTTGGAACCCATTGAGTTTTGTAATTGCTACGACAGGTTCTATATTGCTCTTGGGCGAGCCCCTGCATCTTGGGAGCGTTTTGGGTGGGATTCTGCTGGTTTCAAGTCTCTACAGTGTATTGTGGGCAAAAAGCAAAGAAGGAATGACTCATCAGAATTCTTTACCTTTTCAAACACATACAGAAACAACGCAAGCCGTGTAA 1047 0.4107 MGELKPYLAMFLIQLIYSGLTLFSKAAFNEGINVHVFVFYRQLTGAVILVPLALILERYIAVPFSFIIFCKIFMFSFFGLTLTLNMQAVGLVYTSATLAAAFNNTLPASTFFFAVLLRMERVNIRTISGITKIGSVLLCMVGVATLAFYKGPQLGTVHHRLSGSHNHNSQQHEDHFSSRTRWILGSFLLFLAMIMWSFWLIIQAQFLKSYPSKLMFTSVQCLSSSIQSFGVAIAFERDIQQWKLGWNIELLAVVYCGTLVTAVAYYMQAWVIEKKGPVFIAIWNPLSFVIATTGSILLLGEPLHLGSVLGGILLVSSLYSVLWAKSKEGMTHQNSLPFQTHTETTQAV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0488 348 PANTHER WAT1-RELATED PROTEIN 5 335 - -
Apr1g0488 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 148 - -
Apr1g0488 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 326 - -
Apr1g0488 348 PANTHER WAT1-RELATED PROTEIN 5 335 IPR030184 GO:0016021|GO:0022857
Apr1g0488 348 Pfam EamA-like transporter family 5 131 IPR000620 GO:0016020|GO:0016021
Apr1g0488 348 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0488 Apr-Chr1 5960852 5965877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0488 1 256 Nodulin-like Gene Family AT5G64700 49.807 9.65e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0488 - - vun:114162763 453.366