Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0487 ATGAAAGGAAACAATCCTTATCTTGTTGTAATTGCCATACAAGCCATATACGCTGCTATGTTTCTTCTCTCAAAAGCTGCATTCGACCATGGCATGAACAATTTCATCTTCGTCTTCTATAGACAGGCAATAGCGACCCTTTTCTTGATCCCTTTCACCTTCTTCTTCGAACGGAAAACTGCACCCCCTTTGTCTTTCTTGACCTTCTGCAAGATTTTCTTTCTCTCTCTCTGTGGGATTACTTTAAGTTTGGACATATATGGTATTGGTCTTATTTACACCTCTGCTCCTTTGGCTGCTGCAACCACAAACTGTCTTCCAGTGATCACGTTTCTCTTGGCGCTTCTACTAAGGATTGAGAGTTTGAAAATAAAGACGGCGGCTGGGATTGCTAAGTTGGTAGGCATTGTGGCATGTTTGGCTGGTGCAGCAACTCTTGCCTTTTATAAAGGCCCTCAATTGAAACTTTTAAGCCATTATCACCTTTTGGATTTTTACCTTAAAAGCCAACAACATCAAGGTCATGCTCAATCCAGCACATGGATAAAGGGTTGCTTCCTCTTGCTTCTCTCTAACATGTGTTTCGGGCTGTGGCTTGTATTCCAGGCTTTCATTATAAAGGGCTATCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCAATTCAGGCTTTGGTCATTGCCTTGGCCATAGAAAGGGACATTGAGCAATGGAAGTTGGGTTGGAATGTTAGACTCCTTGCCGTAATATACTGTGGAATTATGGTCACTGGTGTCACATATTACTTACAGACATGGGTTATAGAAAAGAAAGGACCTGTGTTTCTAGCCATGTCAACTCCACTGGCTCTGATTATTACAATCTTCTCCTCTGCAATTGTCTTCGGCGAGATAATCAGTTTGGGAAGCCTTTTAGGTGGGTTGGTGTTGATTATAGGACTATACAGCGTACTGTGGGGAAAGGGCAGGGAGCATATGCCAAAAGCCACACAAGATGTGGAGCAGGCGTCGGGTTAA 1026 0.4308 MKGNNPYLVVIAIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATLFLIPFTFFFERKTAPPLSFLTFCKIFFLSLCGITLSLDIYGIGLIYTSAPLAAATTNCLPVITFLLALLLRIESLKIKTAAGIAKLVGIVACLAGAATLAFYKGPQLKLLSHYHLLDFYLKSQQHQGHAQSSTWIKGCFLLLLSNMCFGLWLVFQAFIIKGYPSKLLLTTLQCFLSSIQALVIALAIERDIEQWKLGWNVRLLAVIYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALIITIFSSAIVFGEIISLGSLLGGLVLIIGLYSVLWGKGREHMPKATQDVEQASG* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0487 341 PANTHER WAT1-RELATED PROTEIN 7 329 IPR030184 GO:0016021|GO:0022857
Apr1g0487 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
Apr1g0487 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 326 - -
Apr1g0487 341 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Apr1g0487 341 Pfam EamA-like transporter family 6 135 IPR000620 GO:0016020|GO:0016021
Apr1g0487 341 PANTHER WAT1-RELATED PROTEIN 7 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0487 Apr-Chr1 5947515 5951110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0487 1 255 Nodulin-like Gene Family AT5G64700 59.924 1.20e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0487 - - gmx:100804562 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0487 1 5947515 5951110 Apr1g0487 1 5947515 5951110 ECH
Apr2g0993 2 16197163 16201936 Apr1g0487 1 5947515 5951110 PCT