Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0470 ATGGAATGCATGGATGTTGCATGGAAGCCACGTGTTGGGTTACAGTTTGACACTCTTGAAGCAGCATGGAAATATTGGTGTGAATATGGAAGGATAACAGGATTTGGTGTGAGGAAACAATACTGGAATAGGCGAAAGGTTGATGGTGTTATTTCATCTTGTCGGTATGTTTGTTGTAAAGAGGGACATCGAAAAGATGATAAAAGAACAGTGATGAAGCCCAGGGCAGAAACTAGGACTGATTGTCTTGTAAGAATAACATTATTTTTAGGAAGCAACAACAAATATGTTGTACATGAGTTTGTTGAAGAGCATAATCACCCATTACAAGTTCCAGAAACAACACACATGCTTGCTTCACATCGTAACATAACTGAAGTCCAAGCTCATCAAATCGATTTGGCCGAGTCCTCAGGATTGCAACAAAAATCCTCATTTCAGCTAATGAGCACACTTGCAGGACATCGAACTAATGTTGGCTATACTCCTCTGGATGCAAAAAATTATTTGAAGGCTAAGAGACAAAGGGGAATGTTATATGGAGAAGTTGGTTGCTTAATGGAATGCTTTCAGCGACAGTTAATTGAGAACCCATCATTTTTTCATGCATACCAAATGGATGCTGAGGAACAAATCACAAATGTTTTTTGGGCAGATGCGAAGATGGTAATTGATTACAGGTGTTTTGGTGAAGTCATATCATTAGACACTACATATTGCACCAACCAAACTAATAGACCTCTAACCTTGTTTTCAGGTTTTAATCATTATCAAGGTGTTGTTATCTTTAGGGCAGCCCTGTTGTATGATGAAACAGCAGAATCCTTTAAGTGGTTATTTGAGACATTCTTGGAAGCACACAATCAAAAACAACCTCAAACAATTTTTACAGACCAAGATCAAGCTATGGCCAAGGAGAAATGGGCATCATGTTATCTCAAGGATGTGTTCACCCTTGGAATGCGAAGTACTCAATTAAGTGAAAGTCTAAACTCTGATTTTAAGGCATGTATGAAACCTGGTGTTGGTATCAAACAATTCTTTGCTCACTTTGAACGAGTTGTCGAAGACAAGCGTTACAATGAGCTGAAACATGAGTACGACTTTCGCTATAAGCTACCCATGTTGCGGTATGAGGTAGAAGGAGATCCTAAACTTAGTACCATACGTCGATACCGTCACCTAGCAGGTAAAATGATTAGGTTGGCCTGTGACGTTTCTACTTCAGAAGAATATTGTCAGCTAGTTGATGACAATATTAACAACTTAATTAGCAAAATCACAAAGCTTCGACTACAAACAAATAGTCTTACGGATAAATATAAGGATGATGCACAAATGTCGGCCAATAATAATGGTACACAACCTAGGGGATTCAAGCTCCGACCAAGCACTAAGAGGAAAGGGAATAAACGTTTCAAAAGTTGGGTTGAGCTACAAGCAAATAGAAAGAAGAGCATAACTCCAATTTTAGATCAATCAACATCTCAGGGACCACTTCATGATATCAATGATTCTGGCCTGGATGATATTTGA 1536 0.3867 MECMDVAWKPRVGLQFDTLEAAWKYWCEYGRITGFGVRKQYWNRRKVDGVISSCRYVCCKEGHRKDDKRTVMKPRAETRTDCLVRITLFLGSNNKYVVHEFVEEHNHPLQVPETTHMLASHRNITEVQAHQIDLAESSGLQQKSSFQLMSTLAGHRTNVGYTPLDAKNYLKAKRQRGMLYGEVGCLMECFQRQLIENPSFFHAYQMDAEEQITNVFWADAKMVIDYRCFGEVISLDTTYCTNQTNRPLTLFSGFNHYQGVVIFRAALLYDETAESFKWLFETFLEAHNQKQPQTIFTDQDQAMAKEKWASCYLKDVFTLGMRSTQLSESLNSDFKACMKPGVGIKQFFAHFERVVEDKRYNELKHEYDFRYKLPMLRYEVEGDPKLSTIRRYRHLAGKMIRLACDVSTSEEYCQLVDDNINNLISKITKLRLQTNSLTDKYKDDAQMSANNNGTQPRGFKLRPSTKRKGNKRFKSWVELQANRKKSITPILDQSTSQGPLHDINDSGLDDI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0470 511 MobiDBLite consensus disorder prediction 443 472 - -
Apr1g0470 511 Pfam FAR1 DNA-binding domain 25 110 IPR004330 -
Apr1g0470 511 PANTHER OS03G0181600 PROTEIN 305 365 - -
Apr1g0470 511 PANTHER OS03G0181600 PROTEIN 4 304 - -
Apr1g0470 511 MobiDBLite consensus disorder prediction 488 502 - -
Apr1g0470 511 MobiDBLite consensus disorder prediction 443 459 - -
Apr1g0470 511 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 305 365 IPR031052 GO:0006355
Apr1g0470 511 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 304 IPR031052 GO:0006355
Apr1g0470 511 MobiDBLite consensus disorder prediction 488 511 - -
Apr1g0470 511 Pfam MULE transposase domain 232 304 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0470 Apr-Chr1 5789723 5792152 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr1g0470 FAR1 2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0470 - - aprc:113850480 1057.36