Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0458 ATGGGAGAAGTGCAGCAAATAGTGGAAATGAAGAAGGAAGTGACAAACAATACAACAACAAGGTCTGAAAGCAAAGCAAGGCTTGCGATTTTGGAACTAGCTCACATGATGAGTGTTCCAATGTCCCTAAACGCTATCTTACACCTCAAAGTCCCCGAGGCCATGTGGCAAGACGGTTCCAATACTCCTCTCTCCGCCTCCCAAATTCTCTCAATCATTCGTCCCCACGGCGGCGCCGACGCGGAGAACCTCCAACGCATCCTCCGCTTGCTCACAAGCTACGACATATTTGACGAGCACTTGTGCAGCAGTGGCCAAAGGAAATACTCTCTCTCCGAAATCGGAAAGACCCTCGTTGACGATGAACAGGGCCTATCCTATGCTTATTACATGCTCCAGCACCATCAGGATGCGCTGATGCGAGCATGGCCGTTGGTGGGGGAGGCAGTGGTGGATCCAACGACGGAACCATTCGTGAAGGCAAACGGAGAGGGAGCGATAGGGTACTACACGAAGCGAGGAGATGTAGTGGGTTTGCTTTACAAGGCAATGGCTGGGATGGCTGGGCCATTGATGAGGGAAATTCTTCAAGTCTACGATGGCTTCGAAGGCGTAGAGACACTCGTTGATGTTGGTGGCAACACGGGTGTTTCTCTTCGCATGATTATGGACAGCTTCCCCAACATCCGCAAAGGTATCAACTTCGATCTTCCCGACATGGTGGCCCGCGCAGCCCCCATTCCAGGTATAACCCATGTTGGCGGTGACGCTTTGGAATATGTCCCCCCTGGGGATGCTGTCTTCATCAAGTGGGTGTTCTTATCATGGACGGATGCGGAAAGCAAGCTGGCTATGGAGAACTGCCACAAGGCACTTCCGATGGACGGAAAATTGATTATATGCGAACCGGTGGCGCCGGAGCTGACGGACGAGAGTCGCAGAACGAGAGCATTGCTTGGGGGTGACATATTCGTAATGACAATGTATAGAACGAAGGGGAAGCACAGAACTGAAGAGCAATTCAGACAAATCGGCATTTCTGCTGGTTTTTCTCGTTTCCGTGCCCTCTACATTGATCCTTATTTGACCGTCCTTGAGTTTCAGAAATGA 1110 0.5108 MGEVQQIVEMKKEVTNNTTTRSESKARLAILELAHMMSVPMSLNAILHLKVPEAMWQDGSNTPLSASQILSIIRPHGGADAENLQRILRLLTSYDIFDEHLCSSGQRKYSLSEIGKTLVDDEQGLSYAYYMLQHHQDALMRAWPLVGEAVVDPTTEPFVKANGEGAIGYYTKRGDVVGLLYKAMAGMAGPLMREILQVYDGFEGVETLVDVGGNTGVSLRMIMDSFPNIRKGINFDLPDMVARAAPIPGITHVGGDALEYVPPGDAVFIKWVFLSWTDAESKLAMENCHKALPMDGKLIICEPVAPELTDESRRTRALLGGDIFVMTMYRTKGKHRTEEQFRQIGISAGFSRFRALYIDPYLTVLEFQK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0458 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 369 IPR016461 GO:0008168
Apr1g0458 369 PIRSF O-mtase 7 369 IPR016461 GO:0008168
Apr1g0458 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 366 IPR029063 -
Apr1g0458 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Apr1g0458 369 PANTHER O-METHYLTRANSFERASE 18 368 IPR016461 GO:0008168
Apr1g0458 369 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Apr1g0458 369 PANTHER OS02G0823400 PROTEIN 18 368 - -
Apr1g0458 369 Pfam Dimerisation domain 41 92 IPR012967 GO:0046983
Apr1g0458 369 SUPERFAMILY "Winged helix" DNA-binding domain 23 121 IPR036390 -
Apr1g0458 369 Gene3D - 9 118 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0458 Apr-Chr1 5669723 5672725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0458 17 369 Monolignol Biosynthesis Gene Families AT3G53140 61.345 1.70e-163 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0458 - - ccaj:109819366 555.058