Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0437 ATGGCAGATGGAAGCGCCAACCTTCCTCCTGGCTTCTTTTTCTCTCCAACTGATGAAGAACTTGTCCTTCACTTTCTCTATTGTAAGGCTTCTCTTATACCTTGCCATCCCAACATCATCCCTGATCTTGATCTCTCTCAGCTTCACCCTTGGGAATTAAATGGTAAGGCGTTGTCAAGTGGAAATCAATACTATTTCTTCGCCAAAGTGAAGGAAAACAGAACTGCAGAAAATGGGTATTGGAAGGAAATAGGTGTGACAGAACCTATATTGTCAACCGTTAAGAAGAAAGTGGGGATGAAGAAGTACTTGGCATTCCACATTGGCGAAGCTCCACTTGGTACTGAAACCAATTGGTTAATGCAAGAATATCATATTTGTTCTTCTGGGATTGACACTGCGTCATATCGAAGTGGCACTAGAAGACGAAAACATGATCAAAGTTGGAGCAAGTGGGTTTTATGCAGAGTGTATGAAAAGAATAAGTCTCAACAAGGTGTAAACTACTGCTATAGTGATGACGACGACAGTGGAACAGAGCTTTCATGGCTAGACGAAGTTTATCTGACGTTGGATGATGATTTGGAAGAAATAAGCATGCCTAATTAG 609 0.4138 MADGSANLPPGFFFSPTDEELVLHFLYCKASLIPCHPNIIPDLDLSQLHPWELNGKALSSGNQYYFFAKVKENRTAENGYWKEIGVTEPILSTVKKKVGMKKYLAFHIGEAPLGTETNWLMQEYHICSSGIDTASYRSGTRRRKHDQSWSKWVLCRVYEKNKSQQGVNYCYSDDDDSGTELSWLDEVYLTLDDDLEEISMPN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0437 202 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 199 - -
Apr1g0437 202 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Apr1g0437 202 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Apr1g0437 202 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Apr1g0437 202 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Apr1g0437 202 PANTHER NAC TRANSCRIPTION FACTOR 56 2 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0437 Apr-Chr1 5396097 5397025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0437 1 165 NAC Transcription Factor Family AT1G61110 41.954 3.49e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr1g0437 NAM 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0437 - - gmx:100170711 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0437 1 5396097 5397025 Apr1g0437 1 5396097 5397025 ECH