Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0425 ATGGCCGAATTTTTCGTCTTCGATATTGCAGAATCACTGCAACGTAAGCTTGCTTCTCAAGTTTATGAAGAAGTTTCTCGAGCCTATCATGTGTACGAGGATTTTCAAGGGATCAAAGACACCTTGTCAATTGTGAAAGGTGTACTATTGGATGCTGAGGAGAAGAAGCAACAGAAACATGGCTTGCGTGAATGGCTGAGGCAGATTCAACGCGTCTGCTACTATGCTGAAGATGTCTTTGATGAATTTGATTGCCAAACATTGCGAAAGCAAGTTGTCAAAGCTTCTGGCAGCATCAAGATGAAGGTAGGACACTTCTTTTCTTTGTCTAATCCTCTTATTTTCCATCTTAGGATGGCTCGTCAAATCAAAGATGTTAAGGATAGATTGAATAAGGTGGCAGATGATGGGAACAAGTTTGGTCTTGAGAGGATTGATGTTGACCAAAGAGTTCTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGGTGTGTTAGGAAGGGAGAATGATAGGGAAGAAATTATCAAGCTTTTGTTGCAACCGCTCCCTGATGGTGGCTGTGATCAAAGCCTATGTGTTATTCCCATAGTTGGAATTGGTGGCTTGGGGAAGACCACACTTACGAAGTTGGTGTTCAATGATAGGAGGATGGATGAAGTTTTTCAATTGAAGATGTGGGTCTGCGTCTCGGATGATTTTGATATTAGGCGGATCATTATTAAAATCATCTACTCTACTTCTGCTTCAGCTCCAACTACTGCTCTTGGTCCCCAAGAAAATGTCAACCACTTAGACATTGAGCTGCTACAGAGAATTCTCAGGTATAAACTTCTAGGTCATAAGTTTTTACTCGTCTTAGATGATATATGGAATGAAGATCGTGCAAAATGGATAGAGTTGAAAGACTTAATAAATACTGGAGCTGTGGGAAGCAAGGTCTTGGTGACAACACGTAGTAACTCAATTGCTTCAATGATGGGCACTGTTCCCTCCTATAATTTAGCAGGCCTTTCTTTGGAGAATTGTTTATCTCTGTTTATCAGATGGGCATTCACGGAAGGCGAAGAAAAGAAACATCCAAATCTAGTGGAGATTGGAAAGGATATTGTGAAAAAGTGTCGAGGGGTTCCATTGGCAGTAAGAACGTTAGGAAGTTCCCTGTTCTCAAATTTTGATTTAGATAGTTGGGAATTTGTAAGAAAACATGAAATTTGGAACTTAAAACAAAAGAAAGATGACATTTTACCAGCCCTTAAGTTGAGCTATGATCAAATGCCATCCAATTTGAGGCACTGTTTTGCTGTGTTTTCACTTTTCCCTAAAGATTTTGGCTTTGGTAATACTGAAATTATTTATCTTTGGCTGGCACTTGGACTGCTTCAGTCTCCAGATGGAAGTCAAAAGCTAGAGAATGTTGGTATACAATATATTGCTGAGTTACATTCAAGATCATTTCTTGAAGATTTTGAAGACTTTGGTCACTTTGGCCTTTTCAAAGTACATGATTTGGTACATGATCTTGCACTGGATGTTGCAAAAGCAGAGTTTCTTGCGGTGAACTCCCACACTAGCAATATACCTGAGCAAGCAAGGCATTTGTCAATTGTTGAAAATGATTCACTTAGTCCTGCTTTGTTCCCCAAGTCTAGAACTTTGAGAACTATATTATTTCCCATCGATGGAATAGGTGTTCACTGTGAAGCTCTACTGGATACATGGATAACAAGATACAAATACTTACGGCTTTTAGATTTAAGTGATTCTTCATTTGAGACCCTGCCTAATTCAATTGCTAAATTGGAGCATCTACAAGGCATCGATCTTTCAAATAATTGGAAAATAAAAAGACTTCCTCATTCTATTTGCAAACTACAAAATTTGAAACTTTTTTCAGTAAGAGGATGCATGGAGCTTGAAACTTTGCCTAATGGGTTAGGGAAGTTGATCAGCCTTCAACATTTGTATATAACCACAAAACAATCAGTTCTGCCACAGAATGATTTTGCAAGTTTGAGCAATCTGCAAACTTTGAGTTTTGAACATTGTGACAAATTGAAGTTTTTGTTCAGAGGGGTAGCAGAACTCCCTTCCCTTCAAACCTTGTTTGTTCAATCATGTGGGAGCCTAGAGTCCTTACCGCTTTACATTCTTCCTAAATTAGAGGTTCTGTTAGTAATACGATGCGAGATGCTAAAGCTGCCGTTGAACTACGAAACCCCAATCCAAAAATTGAGGATGAAATTTCTGCATCTTGAGCATTTTCCAAGGCAGATGACATTGCCTGATTGGATTCAAGGAGCTTCTGACACCCTAAAGACATTGATAATTTTTGATTTTCCTAGTCTTAAGATGCTTCCTGAGTGGCTAACAAGAATGACTCATCTTAAGACACTCCATATTGTGAACTGTCCTCAACTCATGTGTCTCCCAAGTGACATGCATCACCTCACTGCCCTTGAAGATTTGACCATAGATGGTTGTCCTGAGTTGTGTCGAAAATGTCAGCCACAGTCTGGTGAGTATTGGCCCTTGATTGCTCACATCAAACACGTTTCCATTGCAGATCCAAGACAAGAGGGGAAACTTCTTTTTCGAATGCAATCGCGGATGCGGCTGAGATTGCGCGGTTAG 2640 0.3977 MAEFFVFDIAESLQRKLASQVYEEVSRAYHVYEDFQGIKDTLSIVKGVLLDAEEKKQQKHGLREWLRQIQRVCYYAEDVFDEFDCQTLRKQVVKASGSIKMKVGHFFSLSNPLIFHLRMARQIKDVKDRLNKVADDGNKFGLERIDVDQRVLQRREMTYSHVDASGVLGRENDREEIIKLLLQPLPDGGCDQSLCVIPIVGIGGLGKTTLTKLVFNDRRMDEVFQLKMWVCVSDDFDIRRIIIKIIYSTSASAPTTALGPQENVNHLDIELLQRILRYKLLGHKFLLVLDDIWNEDRAKWIELKDLINTGAVGSKVLVTTRSNSIASMMGTVPSYNLAGLSLENCLSLFIRWAFTEGEEKKHPNLVEIGKDIVKKCRGVPLAVRTLGSSLFSNFDLDSWEFVRKHEIWNLKQKKDDILPALKLSYDQMPSNLRHCFAVFSLFPKDFGFGNTEIIYLWLALGLLQSPDGSQKLENVGIQYIAELHSRSFLEDFEDFGHFGLFKVHDLVHDLALDVAKAEFLAVNSHTSNIPEQARHLSIVENDSLSPALFPKSRTLRTILFPIDGIGVHCEALLDTWITRYKYLRLLDLSDSSFETLPNSIAKLEHLQGIDLSNNWKIKRLPHSICKLQNLKLFSVRGCMELETLPNGLGKLISLQHLYITTKQSVLPQNDFASLSNLQTLSFEHCDKLKFLFRGVAELPSLQTLFVQSCGSLESLPLYILPKLEVLLVIRCEMLKLPLNYETPIQKLRMKFLHLEHFPRQMTLPDWIQGASDTLKTLIIFDFPSLKMLPEWLTRMTHLKTLHIVNCPQLMCLPSDMHHLTALEDLTIDGCPELCRKCQPQSGEYWPLIAHIKHVSIADPRQEGKLLFRMQSRMRLRLRG* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0425 879 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 750 - -
Apr1g0425 879 Gene3D Ribonuclease Inhibitor 744 842 IPR032675 -
Apr1g0425 879 Pfam NB-ARC domain 187 426 IPR002182 GO:0043531
Apr1g0425 879 Gene3D - 424 513 IPR036388 -
Apr1g0425 879 Gene3D - 339 423 IPR042197 -
Apr1g0425 879 Gene3D - 149 332 IPR027417 -
Apr1g0425 879 PRINTS Disease resistance protein signature 196 211 - -
Apr1g0425 879 PRINTS Disease resistance protein signature 279 293 - -
Apr1g0425 879 PRINTS Disease resistance protein signature 376 390 - -
Apr1g0425 879 PRINTS Disease resistance protein signature 672 688 - -
Apr1g0425 879 PANTHER DISEASE RESISTANCE PROTEIN RP 6 750 IPR044974 GO:0006952
Apr1g0425 879 CDD RX-CC_like 2 135 IPR038005 -
Apr1g0425 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 437 IPR027417 -
Apr1g0425 879 Gene3D - 10 124 - -
Apr1g0425 879 Pfam Rx N-terminal domain 11 96 IPR041118 -
Apr1g0425 879 SUPERFAMILY L domain-like 502 846 - -
Apr1g0425 879 Gene3D Ribonuclease Inhibitor 540 662 IPR032675 -
Apr1g0425 879 Gene3D Ribonuclease Inhibitor 663 738 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0425 Apr-Chr1 5230300 5233327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0425 197 833 WRKY Transcription Factor Family AT5G45050 20.455 3.90e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0425 - - gmx:100795479 1268.45