Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0392 ATGCAGGAGGAGAAGAAGATGAAGGTGAAGAAAGGGTGGCTTGCTGTTCAAGTGGGTTTAGAAGAGGAAGAAGGGTCAGAGAGATTTGTTATACCAATTTCATACCTTTACCATCCTCTCTTCAAGGGTCTTCTAGACAAAGCTCGTGAGGTTTATGGGTACCACACCGATGGGCCTCTCAAGCTTCCATGTTCAGTGGATGATTTTGTTCATCTTCGTTGGCGAATTGAGAAAGAGTCCACTCATCACCATCACCATCATAACCACAACCATCATCGCCTTCCTCATGCTTTCTACTTCCACTCTTGTTAA 312 0.4455 MQEEKKMKVKKGWLAVQVGLEEEEGSERFVIPISYLYHPLFKGLLDKAREVYGYHTDGPLKLPCSVDDFVHLRWRIEKESTHHHHHHNHNHHRLPHAFYFHSC* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0392 103 Pfam Auxin responsive protein 5 75 IPR003676 GO:0009733
Apr1g0392 103 PANTHER SMALL AUXIN-UP RNA-RELATED 7 92 - -
Apr1g0392 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0392 Apr-Chr1 4912655 4912966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0392 9 89 Calmodulin-binding Proteins AT5G20810 44.444 1.07e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0392 K14488 - gmx:100809305 174.866