Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0377 ATGGAGAGGAAATCACTTGGCTTCTTGTTCTTGCTCCTTCTTGTCCTTGCTTCCCCAGAAGTGGTGGTGCAGACAGAGGGAAGGGTGTGCGAGTCACAGAGCCACGGCTTCAAAGGCGCATGCGCCGGTGACCACAACTGTGCTCTCGTTTGCAGGAACGAAGGTTTCTCCGGTGGCCACTGCCGAGGGTTCCACCGCCGCTGCTTTTGCACCAAACTTTGTTGA 225 0.56 MERKSLGFLFLLLLVLASPEVVVQTEGRVCESQSHGFKGACAGDHNCALVCRNEGFSGGHCRGFHRRCFCTKLC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0377 74 PANTHER DEFENSIN-LIKE PROTEIN 6 4 74 - -
Apr1g0377 74 Gene3D - 28 74 IPR036574 -
Apr1g0377 74 CDD Knot1 39 71 IPR003614 GO:0006952
Apr1g0377 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Apr1g0377 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Apr1g0377 74 PANTHER DEFENSIN-LIKE PROTEIN 1 4 74 - -
Apr1g0377 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Apr1g0377 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Apr1g0377 74 Pfam Gamma-thionin family 28 74 - -
Apr1g0377 74 SMART gth_4 29 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0377 Apr-Chr1 4718490 4718804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0377 1 74 Plant Defensins Gene Families AT5G63660 59.459 1.06e-27 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0377 - - gmx:547938 119.783