Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0374 ATGTCAAGTTTTCACGTTGGGGGTAAGGTCGTCGACCGAGTCGATTTGCTGAGGAAGAAGCAATGGCCATGGCGCCTCGACGTTTGGCCTTTCGCGATAGTGTACGCCGTTTGGATTTCGGTAATTTTTCCTACCCTCGATTTCGTCGATGCCGCTATTGTTTTGGGCGCGCTCTTTGCACTTCACATCCTCGTTTGGCTCTTCACTGGTTGGTCCGTTGATTTCAAATGTTTCGCTCATTATAGCAAGGTTAAAAATATTCACCAGGCTGATTCATGTAAGATAACTCCGGCTAAGTTCTCGGGTTCTAAGGAAGTCGTGCCTCTTCATTTTCGGAAAAGTTCTGCAGGTTCTTCATCAGCGGTGGATTTAGAAGAGATTTATTTTGATTTTAGAAAGCAATGTTTTGTCTATTCTAAGGAGAAGGGGACTTTTTGCAAACTTCCTTACCCTACCAAGGAAACTTTTGGATATTATCTCAAGAGTAGTGGCCATGGGTCAGAAGCTAAAGTTCTTGCTGCTACTGAGAAATGGGGACGGAACGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTTACTCTATTTATGCTGTTCATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAAACACTAACTGAGTTAAGACGTGTTAGAGTTGATAGTCAGATTCTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGTACAGACCTTTTGCCTGGGGATGTTGTCTCCATAGGCCGCTCTTCTGGTCAGAATGGAGAGGAGAAATCTGTACCAGCAGACATGCTTCTATTGGCTGGAAGTGTGATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTTTCAATTGCGGGTAGGGGGATGGAAGAGAAGTTGTCAGCAAAGCGAGATAAGAACCATGTTTTATTTGGTGGAACTAAAATATTGCAGCACACTCCAGATAAGAGTTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCATGAGGACGGGGTTTGAAACAAGTCAAGGAAAGTTAATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTCTTATTGCTGCTGGTTATGTACTTGTTAAGGGGCTAGAAGATCCGTCAAGGAGCAAGTATAAACTTATACTAAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCGCTGGCACGACGTGGGATTTTTTGCACTGAACCTTTTCGAATACCATTTGCTGGGAAGGTTGATATATGCTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGATTGAATGGAACTACAGATTTGGACTCTGATATGAGCAGAGTGCCTGTGCGAACAGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAAGGGAATTGATTGGAGTTATAAATCTGATGAGAAAGCTGTTCCAAAAAAGGGAAATGGCCATCCTGTCCAAATTGTTCACCGGTACCATTTTGCATCTCATTTAAAACGAATGGCAGTTGTTGTTCGCATTCAGGAGGAATTTTTAGCCTTTGTGAAGGGTGCCCCAGAAATTATACAAGATAGGCTCATTGAAATACCACAATCATATGTTGAGACATACAAAAAATATACACGCCAGGGGTCTCGGGTTCTTGCTCTGGCTTACAAGTCTCTTTCTGACATGACGGTGAGTGAAGCTAGAAGCTTGGATAGGGATATAGTGGAGAGTGGACTTACTTTTGCAGGTTTTGTGGTATTTAATTGTCCCATAAGATCTGATTCAGCCAGTGTTTTATCTGAATTGAAAGGATCCTCCCATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGTTCATATTATATCAAAACCTACATTGATCCTTGGCCCAGCACGGGATGGTGGGGGATATAATTGGATGTCCCCTGACGAGACTGAAAACATTCGCTACAGTGAGAAAGAGGTTGAATCTCTATCAGAAACTTATGATCTGTGTGTTGGAGGTGATTGCATTGAGATGTTGCAACAGACATCGGCTCATCTTCTAGTCATTCCTCATGTGAAGGTCTTTGCTAGAGTTGCTCCAGAGCAAAAGGAACTTATCATGACCACTTTCAAAACAGTGGGACGGGTAACTTTGATGTGTGGGGATGGGACCAATGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAGTCGCTCTTCTGAATGCATTGCCTCCTACTCAAAGTGGAAACTCCTCTTCAGATTCATCTGGGGAAGAAGCTTCGAAGTCTGCCAAGCAAAAGAAACCTAAGCCTGCACTGGACACATCTGCAAAGACTGTTGGAGAAGGCACTTCAAAAGCCAAAGTTTCTTCAAAATTAAATTCAACTAGCCACTCATCTGTTAACCGTCATCGATCAGCTGTTGAGATGCAACAGCAGAAGCTTAAGAAGATGATCGATGAGCTTAATGAGGAAGGAGATGGTCGTGCACCTGTTGTCAAGCTTGGTGATGCCTCAATGGCATCTCCATTCACTGCTAAGCATGCATCTGTTGCTCCTACTACTGACATAATTCGTCAAGGTCGTAGTACCCTAGTGACAACTCTACAGATGTTTAAAATTTTGGGCCTCAACTGTCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTACAAGCCACAATAAGTGGTGTCTTCACTGCTGCGTTTTTCCTCTTTATCTCACATGCCCGGCCTATTCCTACTCTTTCAGCTGAACGGCCTCACCCCAACATCTTCTGTGCTTATGTTTTTCTTTCCCTCTTGGGACAATTTTCTATTCACCTGTTTTTTCTGATTTCGTCTGTGAAAGAAGCTGAAAAATACATGCCAGATGAATGCATTGAACCTGATGCAGATTTTCATCCCAACCTGGTGAATACTGTTTCCTATATGGTGAGCATGATGCTTCAGGTGGCCACATTCGCAGTGAACTATATGGGCCACCCCTTCAACCAGAGCATTCCTGAAAACAAGCCATTCCTGTATGCGCTTGTTGCTGCTGTTGGTTTCTTCAATGTGATTACATCTGATCTCTTCAGGGACTTGAATGACTGGTTGAAGTTGGTGCCTTTGCCAGTGGGATTAAGGGATAAACTACTGATTTGGGCGTTTCTGATGTTTGTGGTATGCTACTTGTGGGAGAGACTGTTGAGGTGGGCCTTCCCTGGTAAGATCCCAGCTTGGAAGAAGCGACAAAGACATGCTGTATCTAATTTAGAGAAGAAGAAACAGGTCTAA 3570 0.4308 MSSFHVGGKVVDRVDLLRKKQWPWRLDVWPFAIVYAVWISVIFPTLDFVDAAIVLGALFALHILVWLFTGWSVDFKCFAHYSKVKNIHQADSCKITPAKFSGSKEVVPLHFRKSSAGSSSAVDLEEIYFDFRKQCFVYSKEKGTFCKLPYPTKETFGYYLKSSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLLLAGSVIVNEAILTGESTPQWKVSIAGRGMEEKLSAKRDKNHVLFGGTKILQHTPDKSFPLKTPDGGCLAVVMRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLVKGLEDPSRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLDSDMSRVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKKGNGHPVQIVHRYHFASHLKRMAVVVRIQEEFLAFVKGAPEIIQDRLIEIPQSYVETYKKYTRQGSRVLALAYKSLSDMTVSEARSLDRDIVESGLTFAGFVVFNCPIRSDSASVLSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILGPARDGGGYNWMSPDETENIRYSEKEVESLSETYDLCVGGDCIEMLQQTSAHLLVIPHVKVFARVAPEQKELIMTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNALPPTQSGNSSSDSSGEEASKSAKQKKPKPALDTSAKTVGEGTSKAKVSSKLNSTSHSSVNRHRSAVEMQQQKLKKMIDELNEEGDGRAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPIPTLSAERPHPNIFCAYVFLSLLGQFSIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIPENKPFLYALVAAVGFFNVITSDLFRDLNDWLKLVPLPVGLRDKLLIWAFLMFVVCYLWERLLRWAFPGKIPAWKKRQRHAVSNLEKKKQV* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0374 1189 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Apr1g0374 1189 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Apr1g0374 1189 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Apr1g0374 1189 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Apr1g0374 1189 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 511 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr1g0374 1189 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 780 828 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr1g0374 1189 Pfam E1-E2 ATPase 258 468 - -
Apr1g0374 1189 MobiDBLite consensus disorder prediction 832 848 - -
Apr1g0374 1189 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Apr1g0374 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Apr1g0374 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Apr1g0374 1189 PANTHER CATION-TRANSPORTING ATPASE 1 1181 - -
Apr1g0374 1189 MobiDBLite consensus disorder prediction 867 895 - -
Apr1g0374 1189 Gene3D - 483 668 IPR023299 GO:0000166
Apr1g0374 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1166 IPR023298 -
Apr1g0374 1189 SFLD C1.7: P-type atpase like 469 952 - -
Apr1g0374 1189 Gene3D - 226 388 - -
Apr1g0374 1189 Coils Coil 890 914 - -
Apr1g0374 1189 SUPERFAMILY HAD-like 483 835 IPR036412 -
Apr1g0374 1189 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 44 1146 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Apr1g0374 1189 CDD P-type_ATPase_cation 170 1104 - -
Apr1g0374 1189 SFLD p-type atpase 469 952 IPR044492 -
Apr1g0374 1189 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Apr1g0374 1189 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1181 - -
Apr1g0374 1189 MobiDBLite consensus disorder prediction 831 895 - -
Apr1g0374 1189 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Apr1g0374 1189 Gene3D - 669 844 IPR023214 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0374 1 1189 Primary Pumps ATPases AT5G23630 78.577 0.0 1922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0374 K14950 - gmx:100789385 2199.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0374 1 4653055 4665848 Apr1g0374 1 4653055 4665848 ECH