Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0373 ATGGATCAGTGGGGTGTTCATCATGGAGTCATGTTCATCGGTCATCATGAGGAAGATGGAAGTCAGCCTCCTTCTGATATTTCTAAGGAAGAGGAATCAAACGATGAAGAAGAAAAAATCATTAAAACTGAACCTGTCTTTGTGCATGAAATTAAGAAACGGAAGCGACTTAGCCTTAGTCAGCTTAAAGAGGTGAAAGAGGAATCATGTGGAAGACAAAGCAATAGCAAGCTTAAGTCAAAAAAGCATGAAAGTAGGGACAGATGGTCAGCCGAGAGGTATAAGTTGGCTGAGCAAAACATGTGGGAGGTTTTAAAGGCTGAAGGTGCCACATTTGAAAACCCAATAACCCGACCTGCGCTAAGATTGGCTGCCCGTAAACACATTGGTGATACTGGACTTTTAGACCACTTACTGAAGCACATTGATGGCAAAGTTGCACCTGGAGGGAGTGAGAGGTTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAAAGTGCTGACTTGGACAAGGTCCGCCAGGAGGCAGGGGTACAGGACCCTTACTGGATACCGCCATCTACATATAGGGCAGGCAGTGCCCCCTCCCAGAACACTGATTCTTCTGGTGAATTGAAACAGCTTAAAGTAGAATTGGCCCAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAAGCCAGAGAAAAATGAGATCAGTATGATGGAGGATACTCACAAGGAATTTGTGAAGTGGAAAGCTATGACTGACCGTCGCCTGACTGAAATCATTGCTTCTTTGCAGGGTGTGCAGGGAAAGTATGGTGAACTGGTGACTTGGAAGACTAAAATTGAGCAACAGCTTGTGGAAATAACCAATAAACTGAATGATCTCCAAGCATCAAGGGAATGCACCACTTTTAGTCCTGGTTCAGAAAGATGGAAAGATTGGATAGAAGGCACCAACCTAGAGAATATTCAGGAGGATGCATTTGCAACTTGGATTGGGAATTCAGAACTACTTAATGTTCCAGAAGAGGTTGTACTTGAAGATCCCAACACAACCATACCAGCTCAGCTACCCAATGAAGAACTGACAAACAAGAAGAGCGATGTGCTGGAGTTGGTGCCTGCTAGACAAGAAGATCAACCGAATGTGACCCCTGATTCTTCTACAACTGTTAATTCAAAGTCAGACATTGACAATTCATTGATTATGTTTCAGGAAATGTTCATGGATTTATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGTTGGAGCTATCAAATACTGTATATGGTATGCTGGCAATGAAGTAG 1311 0.4317 MDQWGVHHGVMFIGHHEEDGSQPPSDISKEEESNDEEEKIIKTEPVFVHEIKKRKRLSLSQLKEVKEESCGRQSNSKLKSKKHESRDRWSAERYKLAEQNMWEVLKAEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGSERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPYWIPPSTYRAGSAPSQNTDSSGELKQLKVELAQMKKDMQELIAKKPEKNEISMMEDTHKEFVKWKAMTDRRLTEIIASLQGVQGKYGELVTWKTKIEQQLVEITNKLNDLQASRECTTFSPGSERWKDWIEGTNLENIQEDAFATWIGNSELLNVPEEVVLEDPNTTIPAQLPNEELTNKKSDVLELVPARQEDQPNVTPDSSTTVNSKSDIDNSLIMFQEMFMDLFKWKEKMEQQLLELSNTVYGMLAMK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0373 436 Coils Coil 278 298 - -
Apr1g0373 436 MobiDBLite consensus disorder prediction 13 43 - -
Apr1g0373 436 PANTHER PROTEIN DYAD 3 435 IPR044221 GO:0007131|GO:0051177|GO:0051321
Apr1g0373 436 PANTHER DYAD PROTEIN 3 435 - -
Apr1g0373 436 Coils Coil 202 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0373 Apr-Chr1 4624240 4628037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0373 88 169 PHD Transcription Factor Family AT5G22260 39.759 8.98e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0373 - - gmx:100806484 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0373 1 4624240 4628037 Apr1g0373 1 4624240 4628037 ECH