Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0337 ATGGCAAAAGAACAGCAAAAGCAGCATCCCTGGGGAATCACCAACTCTTTTCAAAATCAGGGTAAAGGTGAAGAAAAACAATTGGAAGTGGAGAACGAGGAAACTGAGGCCCCCTTGCCTCTGAGCGTTACTTCCAAGGTTTTGTACATGTTGGGAGACATCACAGCAGGGCCTGCGTTTATGTTCACGCAATGGCTCCAATTAGTTCGTAAACGCACTTCTAATTATCGCTCTTCTGGCTTCCCTCACCGTCCTTCCACCATGCCTTCTAGCCCGGGAGAATCTACCGAGGATGCAAAAATTGATCACCAAACAGAAATTAGTTTGTGGGAGAGGCTTGGCAAAGCTGAAATGTTGGACATTGAATCAAGCTCCTTTTCTTGGGATAGGCTCTCTTCACTCCACCATACTGAGCACACAAGCAGCAATGAACACTCTGAGGATGAAATGAACAGAGCTCTTGAGGTAACAGTAAATTCGGGAGGAGTAGTCTTCTTTGCCTTATTCAATGGCCTTGGGAGTGATGATATTTTTGGAAAAGAAGTGGCAGCTGTTATAAAGATATCATCTTCCAGAATGGCAACACAATCCGAACGCCTTGGTTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTTAGAGTGGCTCCAAATAAAAGAGGCTACAGAAAAAGCAAGAGATGCAGCAAGTTCTGCGGGTGATGAAATTAGTGAAATGACATGCACAGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTCTATTGTTTATGAGTTATGTACATGGTTCACCCATGCTTGAAAGCTCAGGTGCATTTGAATCACAGGAATATGCTGAAAGAACATCAGCAGCCCTTGGCAGGGTAATGATGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGTCAACTTAGATGGCGTGGGAACTCTGCAAACTTGTTATTGGCTGAAAAGATGATATCTACAAGTACAGATATAATAGGAGAAACTTTTGATTCTGCAGCAGTCCGATATGGACCAAGGGTGAGTAGGGCGCTTCATAAAGAAAGAAGGTCAATTTCAGTAGATAGCAGATTGAATTCTCATAATCATAATCCTGGATTGGTATCACAAGGCTCTGGTCTTTCAGACATCACAGAATCATCAATACCCGCAGACATGAGCCTTAAAAGTCAAACATCAGGAGAATCAATGTTTTCTGACTTTAGCATTGTTGCTATTGATTCTGGGGTTCCCCGCCGACCACCTGCTGGAAAACGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTTGAGTTACTACTCAATAGCTCAGAGTTTTCCTCTAACCTGTTACATGAGATAACTGGAGGGAGATTAGGACATCCTCCCCCAGAAGACACAAATGCAACAACTGATGTTCATGCGGGTGATGTAGCCTCAGTAGTCCATGAGTTCCGTACTGGTTTTCGTGCTGCTCTTAGGGATCTGCAGGGATTCCATATATTCCTACTCACACTTCACCAAAAACTTGATAACTTGTTAAGATCATTTATGACTACTATAAGCAGAGTACCATCAGGGGAGTCTGAAAAAGAGGATGCAGTGGTTCCTGATTCACCTTCACTAGCTACTGCTGGCAATTTTTCCTCTCCAACAAGTAAGGAGAGGTTTTCCAATGACATCCATCAAGATTTTAGTGATTCAGAATCACAGAGAACTGCTCCAAGGGCATCATCATCTTCTGGTAATAGAGATTACTGCGACTCTGCTTCTTCTCTGCCAAGAGAATGTTGGCATGGAAAGCACTCTAAAGGAAGTGGGGAGTCACTTCGTGGTCTCCGCTTGACAACTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGACTCTGAATCTAATAAAGAATTGGAACAGTGGAATGAACTGCTTAAAAACGATGCTGTCAAGTTGTGCCAGGAGAATAATTTCAATACAGGATTTTTTGAGGGTAGTGATAACAACACTGTTGTTGATGCATATGAGTTGAAGGTCAGGCTTGAGCATATCCTTGAGAGGATTGCATTGATATCCGAGGCTGCAAATACAGAGAGGCCATCAACTGTTACAAATAGTCTGTTCATTGGTGGTGCACTGGCTGCAAGATCTACATACACACTGCAACACTTAGGAATCACTCATATTATGTGCTTGTGTACAAATGAAATTGGTCAGTCAAGTTCTCAGTTTCCTGATCTATTCACATACAAAAATTTCTCTGTGTGTGACAATGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCTTGTGATTTTATAGACTATGTTGAGCAAACTGGTCTGAGAGTTTTAGTTCATTGCTTTGAAGGGAAAAGCAGAAGTGTCACTTTGGTCCTTGCATACTTAATGCTGAGGAAGAAGTTCACTTTGTTAGAAGCATGGAATGCTCTGAAACGAGTTCATCGTCGATCACAGCCCAATGATGGTTTTGCAAAGATCTTACTGGAACTGGATCAGAAACTGCATGGGAAGGTTTCAATGGAGTGGCAGCAGCGGAAACCAATGATGAAAATTTGCCCTATTTGTGGCAAGAATGCTGGACTAAGCAGTAGCTCACTGAAGCTCCATCTTCAGAAATCTCATAAAAAGCTATCCTCAGGGAGTGTAGATAGTGCCATGACAATGGAGATCCAAAAGGCATTAACAGCTTTGAAGATTAGCCGTGGTGGGAGTGTTAGCCCCTCCCAAAGGCAGTCGCATTCAATGATAGATCAATAG 2793 0.4282 MAKEQQKQHPWGITNSFQNQGKGEEKQLEVENEETEAPLPLSVTSKVLYMLGDITAGPAFMFTQWLQLVRKRTSNYRSSGFPHRPSTMPSSPGESTEDAKIDHQTEISLWERLGKAEMLDIESSSFSWDRLSSLHHTEHTSSNEHSEDEMNRALEVTVNSGGVVFFALFNGLGSDDIFGKEVAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWLQIKEATEKARDAASSAGDEISEMTCTELLEALELSRCLLFMSYVHGSPMLESSGAFESQEYAERTSAALGRVMMLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMISTSTDIIGETFDSAAVRYGPRVSRALHKERRSISVDSRLNSHNHNPGLVSQGSGLSDITESSIPADMSLKSQTSGESMFSDFSIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHEITGGRLGHPPPEDTNATTDVHAGDVASVVHEFRTGFRAALRDLQGFHIFLLTLHQKLDNLLRSFMTTISRVPSGESEKEDAVVPDSPSLATAGNFSSPTSKERFSNDIHQDFSDSESQRTAPRASSSSGNRDYCDSASSLPRECWHGKHSKGSGESLRGLRLTTKLRDFHKFAKVDSESNKELEQWNELLKNDAVKLCQENNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANTERPSTVTNSLFIGGALAARSTYTLQHLGITHIMCLCTNEIGQSSSQFPDLFTYKNFSVCDNEDSNISSIFEEACDFIDYVEQTGLRVLVHCFEGKSRSVTLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLELDQKLHGKVSMEWQQRKPMMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPSQRQSHSMIDQ* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0337 930 MobiDBLite consensus disorder prediction 548 562 - -
Apr1g0337 930 MobiDBLite consensus disorder prediction 530 593 - -
Apr1g0337 930 MobiDBLite consensus disorder prediction 1 37 - -
Apr1g0337 930 MobiDBLite consensus disorder prediction 76 100 - -
Apr1g0337 930 MobiDBLite consensus disorder prediction 370 389 - -
Apr1g0337 930 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 772 824 IPR000387 GO:0016311|GO:0016791
Apr1g0337 930 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 703 848 IPR029021 -
Apr1g0337 930 Pfam Dual specificity phosphatase, catalytic domain 717 844 IPR000340 GO:0008138|GO:0016311
Apr1g0337 930 MobiDBLite consensus disorder prediction 8 23 - -
Apr1g0337 930 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 17 930 IPR035010 GO:0004721|GO:0009737|GO:0043622
Apr1g0337 930 ProSiteProfiles Dual specificity protein phosphatase domain profile. 703 848 IPR020422 GO:0006470|GO:0008138
Apr1g0337 930 SUPERFAMILY Protein kinase-like (PK-like) 64 436 IPR011009 -
Apr1g0337 930 Pfam Actin-fragmin kinase, catalytic 106 422 IPR015275 -
Apr1g0337 930 Gene3D Protein tyrosine phosphatase superfamily 686 858 IPR029021 -
Apr1g0337 930 SMART dsp_5 703 845 IPR020422 GO:0006470|GO:0008138
Apr1g0337 930 CDD DSP 704 841 - -
Apr1g0337 930 MobiDBLite consensus disorder prediction 76 94 - -
Apr1g0337 930 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 17 930 - -
Apr1g0337 930 Gene3D - 276 449 IPR036940 GO:0016301
Apr1g0337 930 MobiDBLite consensus disorder prediction 576 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0337 Apr-Chr1 4089318 4095167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0337 19 914 Protein tyrosine phosphatase (PTP) family AT5G23720 64.978 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0337 K14165 - gmx:102661225 1467.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0337 1 4089318 4095167 Apr1g0337 1 4089318 4095167 ECH