Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0319 ATGGGGAAGAAAAACGTGATTTTGAAGGCGTGGGAGCGTTGCCGATCAATAGGAAGTGGCAGTGGCAACAAGAGGTCACACTCGAAATTGAAAGCTACAGCAAAATCATTGTCAGAGAATAATAATGAGAAGGGTCAAATAGCGCCCCATGGTTGTTTTTCTGTGCACGTTGGACCGGAGAGAAAAAGGTTCATAGTGAAAACAGAGTACGTTAACCACCCACTGTTTCAGATTTTGCTAGAAGAAGCAGAACAAGAATTTGGGTTCGAAAGTGATGGCCCCATTTGGCTTCCCTGTAACGTCGATTTGTTCTACAAAGTGTTGGCTGAGATGGATGGCGAGGAGAATAATAATATCATGAATAATGGTAGAAAAAGCTTTAGCAAAACCAAAGGGTTTTCTTTTTTTGTTCTTCGTGGCCCAGCTCATCTTCCTTGCTATGGCCATCATGCGTATAGTGTTGTGGATTCAGAAATGCTGAGAATAGACCAATTTCAATAG 501 0.4212 MGKKNVILKAWERCRSIGSGSGNKRSHSKLKATAKSLSENNNEKGQIAPHGCFSVHVGPERKRFIVKTEYVNHPLFQILLEEAEQEFGFESDGPIWLPCNVDLFYKVLAEMDGEENNNIMNNGRKSFSKTKGFSFFVLRGPAHLPCYGHHAYSVVDSEMLRIDQFQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0319 166 MobiDBLite consensus disorder prediction 19 45 - -
Apr1g0319 166 Pfam Auxin responsive protein 28 109 IPR003676 GO:0009733
Apr1g0319 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 125 IPR003676 GO:0009733
Apr1g0319 166 MobiDBLite consensus disorder prediction 18 45 - -
Apr1g0319 166 PANTHER SMALL AUXIN-UP RNA-RELATED 3 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0319 Apr-Chr1 3808480 3808980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0319 8 117 Calmodulin-binding Proteins AT5G20810 37.273 9.42e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0319 K14488 - gmx:100793967 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0319 1 3808480 3808980 Apr1g0319 1 3808480 3808980 ECH