Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0318 ATGGCTAATGCAAACATCTCTAGCATCGAGCTGGAAGTAAAGCAAGGAGAACCAGCTAGAGTTCAACCTGAAGAGGAAACAGAAAAGGGACCCTATTTCCTTTCAAACCTTGACCAGAATATTGCTGTTCCAGTGCGCACGGTTTATTCCTTTAAATCTGCTTCTAGAGGAAATGAGGATGCTGCACAAGTTATCAAGAATGCCTTGTCGAAGATTCTTGTCCCTTATTATCCTATGGCAGGAACGTTGACTATAAGCTCTGAAGGGAAGTTGATGGTGGATAACACTGGGGAGGGTGCAGTATTTGTTGAGGCTGAAGCAAATTGTAACATAGAAGACATTGGAGACTTAACAAAGCCAGACCCCGATGCTCTTGGGAAACTGGTTTACAACATCCCTAGTGCTCGAAACATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTCACTTTGGGGCTATGCATGAATCACTGTATGAAAGATGGGCTATGTGCCATGGAGTTTGTGAATGTATGGAGCGAGATAGCGCGAGGATTGGACTTAAAGATTCCACCATTTCTCGATCGAACCATAATCAAAGCACGTAACCCTCCCAAAATAGAGTTTCAACACAATGAATTTGCCGAAATAGAAGATGTATCAAACACTAAAAAACTCTATGAAGAAGAAAAGATGCTCTACAGATCCTTCCTTTTCGACCCCAAGAAGCTTGAGCTACTTAAGAAAAAGGCCACTGAGAATGGGGTTTTGAAAAAGTGCTCAACTTTTGAAGTCCTTTCAGCTTTTGTTTGGAGAGCTAGAACCGCAGCCTTAAGGATGCAACCTGATCAACAAACAAAGCTTCTCTTTGCAGTTGATGGAAGGTCAAAATTTGTGCCTCCAATTCCAAAAGGGTACTTTGGAAATGCTATTGTGTTGACAAATTCAGTGTGTAAGGCAGGGGAGCTATTGAAGAACCCCTTGTCATTTTCAGTGGCATTGATTCGTGGGGCAATTGAATTGGTGACAGATAGTTATATGAGATCTGCCATTGACTATTTTGAAGTGACAAGAGCAAGGCCTTCCTTAACAGCTACACTTTTGATCACAACTTGGACTAGGTTGTCTTTCCACACCACAGATTTTGGGTGGGGGGAACCTTTGTGTTCTGGCCCTGTCACCTTGCCTGAGAAAGAAGTCATTTTGTTCTTGTCACATGGTCAAGAAAGGAAAAGCATAAATGTGCTTCTGGGTTTGCCTGCTTCTGCCATGGAAATTTTTGAAGCACTGGTGATGCAGATATGA 1305 0.4253 MANANISSIELEVKQGEPARVQPEEETEKGPYFLSNLDQNIAVPVRTVYSFKSASRGNEDAAQVIKNALSKILVPYYPMAGTLTISSEGKLMVDNTGEGAVFVEAEANCNIEDIGDLTKPDPDALGKLVYNIPSARNILEMPLMTVQVTKFKCGGFTLGLCMNHCMKDGLCAMEFVNVWSEIARGLDLKIPPFLDRTIIKARNPPKIEFQHNEFAEIEDVSNTKKLYEEEKMLYRSFLFDPKKLELLKKKATENGVLKKCSTFEVLSAFVWRARTAALRMQPDQQTKLLFAVDGRSKFVPPIPKGYFGNAIVLTNSVCKAGELLKNPLSFSVALIRGAIELVTDSYMRSAIDYFEVTRARPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGQERKSINVLLGLPASAMEIFEALVMQI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0318 434 Pfam Transferase family 17 428 - -
Apr1g0318 434 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 12 431 - -
Apr1g0318 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 431 - -
Apr1g0318 434 Gene3D - 215 434 IPR023213 -
Apr1g0318 434 Gene3D - 7 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0318 Apr-Chr1 3790531 3794016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0318 21 434 Monolignol Biosynthesis Gene Families AT5G48930 36.047 8.89e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0318 K15400 - gmx:100794490 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0318 1 3790531 3794016 Apr1g0318 1 3790531 3794016 ECH