Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0276 ATGGCCACGCAAAACCAAACACACTCTCATCCAAACACCACCATCGACCCAAACAACGGTTTCTGCTCTCAATCTAGAACCTTCCACAGCCTCCGTCCAAAAGTCCCTCTCCCTCCGCCGTCTCAGCCTCTCTCCCTCACCGACTATGTGCTCTCTCTCCTCCCCGACGCAGCCGCAGCGGCAGCCGCCGACAACCCCGCCATCATCGACTCCGCCACCAACCGCCACCTCTCTTACTCCCTCTTTCTCCGCCAAGTCAATTCCCTCGCTTCCTCCATCCAATCCCTCACCCCTCTCTCGAAAGGCCACGTGGCATTAATCCTCACCCCTGCTTCCCTGCATGTCCCCGTACTCTACTTTTCCCTCCTCTCTCTCGGCGTCACCATCGCGCCCGCAAACCCACTCAGTTCCCCCTCCGAGTTGACTCACCTGGTTCGACTCGCCAAACCCGCCATCGCCTTCGCCACCTCTGCTACGGCACCCAACATTCCTACCCTCCGATTCGGCACCATCCTCCTCGACTCTCCCGTCTTCCTCTCCATGCTCGACGCAAACAACAACCACCCTCCCCCTCCCCGAGTCGAACTGAGTCAATCCGACTCAGCAGCCATTCTCTTCTCTTCCGGCACCACCGGGCGAGTCAAGGGCGTACTACTCACTCACCAGAACTTCATCGCGTTGATTGGAGGGTTTTATCACCTGAAGCACATGGTTGATGATGGGGTTGACGAGAATCCCCATCCGGTGTCGTTGTTCACGCTGCCCCTGTTCCACGTGTTCGGGTTTTTCATGCTGGTTAGGGCCATAGCCATAGGGGAGACTCTGGTGGTGATGCCTAGGTTTGATTTTGAAGCGATGCTGAAGGCCGTGGAGAGGTACCGGATCACATACATGCCGGTGTCGCCGCCGCTGGTGGTGGCGCTGGCGAAGTCTGAATTGGTGAAGAAGTACGATCTTAGCTCGCTCCGGTTGCTGGGTAGCGGTGGCGCGCCGCTTGGGAAGGAGGTGGCCGAGAAATTCAACGCCAGATTCCCCAACGTCGAAATTGTGCAGGGCTATGGTCTGACTGAAAGTGGAGGAGGGGCATCAAGAACGTTGGGTCTTGATGAGGCTAAGCGCCATGGTTCTGTGGGTCGACTTGCAGAAAATATGGAGGCCAAGATAGTGGACCCTGTAACTGGAGAGGCATTACCTCCTGGCCAGAAAGGGGAGCTGTGGTTGCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGACAAAGCGACTGCTGAAACAGTGGATTCAGAGGGATGGCTGAAGACTGGGGATCTTTGTTATTTTGACTCTGATGGTTTTCTTTACATAGTAGATAGATTGAAGGAATTGATAAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATATACTTCACTCCAATCCTGAAATTGCTGATGCTGCAGTAATTCCGTATCCTGACCAAGATGCAGGACAGATTCCAATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATCACTGCAGATCAGGTCATGGAATTTGTAGCAAAGCAGGTTTCGCCATACAAAAAGATACGACGAGTCTCTTTTATTAACTCTATCCCAAAATCTGCTGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTATCTAGTGGTTCATCCAAATTGTGA 1686 0.5261 MATQNQTHSHPNTTIDPNNGFCSQSRTFHSLRPKVPLPPPSQPLSLTDYVLSLLPDAAAAAAADNPAIIDSATNRHLSYSLFLRQVNSLASSIQSLTPLSKGHVALILTPASLHVPVLYFSLLSLGVTIAPANPLSSPSELTHLVRLAKPAIAFATSATAPNIPTLRFGTILLDSPVFLSMLDANNNHPPPPRVELSQSDSAAILFSSGTTGRVKGVLLTHQNFIALIGGFYHLKHMVDDGVDENPHPVSLFTLPLFHVFGFFMLVRAIAIGETLVVMPRFDFEAMLKAVERYRITYMPVSPPLVVALAKSELVKKYDLSSLRLLGSGGAPLGKEVAEKFNARFPNVEIVQGYGLTESGGGASRTLGLDEAKRHGSVGRLAENMEAKIVDPVTGEALPPGQKGELWLRGPTIMKGYVGDDKATAETVDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHSNPEIADAAVIPYPDQDAGQIPMAFVVRKPGSNITADQVMEFVAKQVSPYKKIRRVSFINSIPKSAAGKILRRELVDYALSSGSSKL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0276 561 Gene3D - 455 555 IPR045851 -
Apr1g0276 561 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 28 550 - -
Apr1g0276 561 Gene3D - 34 454 IPR042099 -
Apr1g0276 561 MobiDBLite consensus disorder prediction 1 20 - -
Apr1g0276 561 CDD 4CL 64 549 - -
Apr1g0276 561 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 550 - -
Apr1g0276 561 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Apr1g0276 561 SUPERFAMILY Acetyl-CoA synthetase-like 50 555 - -
Apr1g0276 561 Pfam AMP-binding enzyme 58 459 IPR000873 -
Apr1g0276 561 Pfam AMP-binding enzyme C-terminal domain 468 543 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0276 Apr-Chr1 3207929 3213011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0276 7 561 Monolignol Biosynthesis Gene Families AT5G63380 59.397 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0276 K01904 - gmx:100804044 907.516