Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0255 ATGGCATCAAGCGAGGGTTTTCTGACCGATGGACAGAGGGAAATTCTGAAGCAAGCGAGTCAGAATGTGGAGAATTTGTCTTCGTCGCCGAAATCTCCATCCACCTTGCTTGCTGAACATCATCATCATCATCATGTGGGAGGTCCTTCTGGGGGTAGTAAGGCACAAACTGCCGGGCATGCTGTTAGGCATGTACGCCGATCGCACTCGGGAAAGTTTGTGCGGGTGAAGAAGGATGGTGCGGGTGGTAAGGGAACTTGGGGAAAATTGCTTGATACAGATGGTGAATCCCGTATAGACAGAAATGATCCAAACTATGACAGTGGCGAGGAACCTTATCAACTGGTTGGATCTACCATTACTGACCCTTTAGATGAATTCAAGAAAGCCATGGTGTCCATCATAGAGGAATATTTCAGTACTGGGGATGTGGACTTGGCTGCATCTGAAATCAGAGAACTTGGGTCAAATGAATATCATTCGTATGTCATTAAGCGTCTAGTGTCCATGGCCATGGATAGGCATGATAGAGAGAAAGAAATGGCTTCGGTCCTGCTTTCAGCTTTGTATGCTGATGTCATCAGCTCTGCACAAATGAGGGATGGGTTTTTCATGCTTATTGAATCTGCTGATGACCTTGCAGTGGACATACTGGATGCAGTTGACATTCTTGCTCTATTTCTGGCACGTGCTGTTGTTGATGACATCCTTCCTCCAGCATTTCTTGCCAGGGCCAAGAAGGCTCTCCCAGAATCTTCCAAGGGAGTTCAAGTAATCCATATTGCTGAGAAAAGTTATCTCTCAGCTCCGCACCATGCAGAACTTGTGGAGAGGCGATGGGGTGGTAGCACTCACATCACTGTTGAAGATGTGAAGAAGAGGATTGCTGATTTACTAAGAGAATACGTGGATAGTGGTGACATATTTGAAGCCTCTAGGTGCATACGTGAATTGGGAGTTTCGTTCTTCCATCATGAGGTTGTGAAGAGGGCTTTGGTACTTGCCATGGAGATCCGTTCGGCAGAACCTCAAATGTTGAAGCTATTAAAAGAAACAGCAGAAGAAGGACTCATTAGTTCCAGCCAAATGGTGAAAGGGTTTTCTCGTTTAGAAGAAGTCCTAGATGATCTTGCCCTTGATATTCCATCAGCCAAAACCTTGTTTCAGTCATTGGTACCCAAGGCAATATCAGAAGGATGGCTTGATGCTTCTTTTTTTAAACCCTCTGGTGAAGATGGGGATATTCTAGTTGAAGATGAAAAGGTGAGGAAGTACAAAAAAGAGGTTGTAATTATCATTCATGAATATTTTCTCTCAGATGACATTCCTGAACTCATTCGAAGTCTTGAAGATCTTGGTGCACCTGAGTACAACCCAGTATTTTTGAAGAAGCTAATAACTCTTGCTATGGACAGAAAGAACAGGGAAAAGGAAATGGCATCCGTACTGCTATCTGCTCTTCATATAGAAATCTTCTCAACTCAAGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCAGAAGATACAGCACTGGATATATTGGATGCTTCGAATGAGCTTGCTCTTTTTGTATCCAGAGCTGTGATTGATGACGTATTGGCTCCTCTGAATTTAGAGGAAATTGGTAGGAGGTTGCCCCCAAAATGCAGTGGGAGTGAAACTGTGTGGATGGCTCGGTCACTCATTGTTGCTCGTCATGCCGGTGAGAGGCTATTGAGATGTTGGGGTGGTGGGACTGGATGGGCTGTTGAAGATGCTAAGGACAAGATTATGAGGCTCTTGGAGGAGTATGAGAGTGGAGGTGTTGTGAGTGAAGCATGCCGGTGTATTCGTGACCTAGGAATGCCTTTCTTTAATCATGAGGTTGTGAAGAAAGCTCTGGTTATGGCCATGGAGAAGAAGAATGATAGGATGTTGGATCTGCTGCAGGAATGCTTTAGTGAGGGTCTGATCACCATCAATCAGATGACCAAAGGGTTCACCCGAATCAAGGATGGCCTTGATGATCTTGCTCTGGACATTCCAAATGCCAAGGAAAAATTCAGCTTCTATTTGGAGCATGCCCTGAGGAAGGACTGGCTCCTCCCATCATTGGATTCCACTGTCACAGATGTCTAA 2124 0.4477 MASSEGFLTDGQREILKQASQNVENLSSSPKSPSTLLAEHHHHHHVGGPSGGSKAQTAGHAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDGESRIDRNDPNYDSGEEPYQLVGSTITDPLDEFKKAMVSIIEEYFSTGDVDLAASEIRELGSNEYHSYVIKRLVSMAMDRHDREKEMASVLLSALYADVISSAQMRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARAKKALPESSKGVQVIHIAEKSYLSAPHHAELVERRWGGSTHITVEDVKKRIADLLREYVDSGDIFEASRCIRELGVSFFHHEVVKRALVLAMEIRSAEPQMLKLLKETAEEGLISSSQMVKGFSRLEEVLDDLALDIPSAKTLFQSLVPKAISEGWLDASFFKPSGEDGDILVEDEKVRKYKKEVVIIIHEYFLSDDIPELIRSLEDLGAPEYNPVFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTQDIVNGFVMLLESAEDTALDILDASNELALFVSRAVIDDVLAPLNLEEIGRRLPPKCSGSETVWMARSLIVARHAGERLLRCWGGGTGWAVEDAKDKIMRLLEEYESGGVVSEACRCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFSFYLEHALRKDWLLPSLDSTVTDV* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0255 707 SUPERFAMILY ARM repeat 422 580 IPR016024 -
Apr1g0255 707 ProSiteProfiles MI domain profile. 424 545 IPR003891 -
Apr1g0255 707 SMART ma3_7 291 402 IPR003891 -
Apr1g0255 707 SMART ma3_7 127 238 IPR003891 -
Apr1g0255 707 SMART ma3_7 588 697 IPR003891 -
Apr1g0255 707 SMART ma3_7 425 536 IPR003891 -
Apr1g0255 707 SUPERFAMILY ARM repeat 584 700 IPR016024 -
Apr1g0255 707 Gene3D - 575 705 - -
Apr1g0255 707 Gene3D - 277 408 - -
Apr1g0255 707 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 699 - -
Apr1g0255 707 MobiDBLite consensus disorder prediction 91 107 - -
Apr1g0255 707 Pfam MA3 domain 426 535 IPR003891 -
Apr1g0255 707 Pfam MA3 domain 127 238 IPR003891 -
Apr1g0255 707 Pfam MA3 domain 589 696 IPR003891 -
Apr1g0255 707 Pfam MA3 domain 292 402 IPR003891 -
Apr1g0255 707 ProSiteProfiles MI domain profile. 290 411 IPR003891 -
Apr1g0255 707 MobiDBLite consensus disorder prediction 14 35 - -
Apr1g0255 707 Gene3D - 120 266 - -
Apr1g0255 707 Gene3D - 417 567 - -
Apr1g0255 707 SUPERFAMILY ARM repeat 287 407 IPR016024 -
Apr1g0255 707 PANTHER PROGRAMMED CELL DEATH 4 1 699 IPR039778 GO:0045892
Apr1g0255 707 MobiDBLite consensus disorder prediction 1 59 - -
Apr1g0255 707 ProSiteProfiles MI domain profile. 126 247 IPR003891 -
Apr1g0255 707 ProSiteProfiles MI domain profile. 587 706 IPR003891 -
Apr1g0255 707 SUPERFAMILY ARM repeat 124 284 IPR016024 -
Apr1g0255 707 MobiDBLite consensus disorder prediction 85 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0255 Apr-Chr1 2787917 2791854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0255 591 683 Eukaryotic Initiation Factors Gene Family AT5G57870 31.250 1.59e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0255 - - gmx:100815729 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0255 1 2787917 2791854 Apr1g0255 1 2787917 2791854 ECH