Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0238 ATGGCTCTATTCCAATGGCTGAACGAAGGCTATATACCATTTTTACTCTTTATATCCATTTTCGTATTCATAGTTCTATTAATAAAACACCTCTTCATGAAAAAGGCAAGAAATGTAAGGTCCAATCTCCCTCCAAGTCCTCCTAGCATACCCATCATAGGCAACCTCCACCAGCTAGGTACCTCTCCACACCTAGCTCTTCAAAGACTTGCTAAGAACTATGGACCCATATTTTTCCTGCAACTTGGTCAAATCCCAACCGTGGTTGTTTCCTCAGCTAGACTTGCAAAGGAAGTGTTGAAAACCCATGATCTTGCACTTTCAAGCCGTCCACAACTCTTCTCAGCCAAATACCTCTTCTACAACTGCACAGACATTGTTTTCTCTCCTTATGGTGCTTATTGGAGGCATATAAGAAAAATTTGCATACTTGAGCTTCTAAGTGCCAAAAGGGTACTCTCATGCATTTCAGTTAGAGAAGAAGAAGTTGCTCGTTTAGTTCATAGGGTTAAAGGGTCTTGTCAAGGCACTGTTGATTTGTCTAAGATGTTGGGACTCTATGCAAATGATGTCCTTTGCCGAGTGGCATTTGGAAGGGGCTTTTCGGAAGGAGGAGATTATCAACGACATGGGTTCCAAAAGATGCTTGATGAGTACCAAGAGCTACTTGGAGGATTCAGTGTTGGTGACTTTTTTCCTTCCTTGGAGTTCATACACAGCTTAACTGGTATGAAGTCAAGACTCCAAGACACTTCTCGAAGATTTGATCAATTATTTGATCAGATACTGAATGAACACATAGGTTCCAATAAAATACAGGAGCATAAGGATCTCGTTGATGTTTTGCTCGAGGTGCAGAAGAATGACTCGGATGAGATGCCTCTCACCACGGATAATATCAAAGCAATCATTTTGGACATGTTTGCTGCAGGAACTGATACAACCTTCATTACCCTTGATTGGGCAATGACAGAGTTGCTAATGAATCCAAAGGTTATGGAAAAAGCACAAAAGGAAGTGAGGAGTGTCTTAGGAGAAAGAAAGGTTGTTGAAGAGAATGACCTGCATCAACTTGAGTACATGAGAGTTATCATCAAAGAGACATTTCGGTTGCATCCTGCGGTTCCAATGTTAGTCCCAAGAGAATCCATGGAGGATGTTGTCATAGAGGGGTACAAAATTCCAGCTAAAACAAGATTTTTTGTCAATGCTTGGGCAATAGGTAGGAACACGGAAAGTTGGGAAGATCCAAATGCATTTAAACCAGAGAGATTTTTAGGGAGTAACATTGACTATAGAGGGCAAGATTTTGAGCTATTACCATTTGGAGCAGGTAGAAGAGGTTGCCCAGGAGGGAACATCTTCATGTTGTTGCTAGACCATACCCTCTATGAAGATTCATGA 1404 0.4131 MALFQWLNEGYIPFLLFISIFVFIVLLIKHLFMKKARNVRSNLPPSPPSIPIIGNLHQLGTSPHLALQRLAKNYGPIFFLQLGQIPTVVVSSARLAKEVLKTHDLALSSRPQLFSAKYLFYNCTDIVFSPYGAYWRHIRKICILELLSAKRVLSCISVREEEVARLVHRVKGSCQGTVDLSKMLGLYANDVLCRVAFGRGFSEGGDYQRHGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKSRLQDTSRRFDQLFDQILNEHIGSNKIQEHKDLVDVLLEVQKNDSDEMPLTTDNIKAIILDMFAAGTDTTFITLDWAMTELLMNPKVMEKAQKEVRSVLGERKVVEENDLHQLEYMRVIIKETFRLHPAVPMLVPRESMEDVVIEGYKIPAKTRFFVNAWAIGRNTESWEDPNAFKPERFLGSNIDYRGQDFELLPFGAGRRGCPGGNIFMLLLDHTLYEDS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0238 467 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 Coils Coil 333 353 - -
Apr1g0238 467 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 451 - -
Apr1g0238 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Apr1g0238 467 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 Pfam Cytochrome P450 44 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 Gene3D Cytochrome P450 36 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 SUPERFAMILY Cytochrome P450 44 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0238 467 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 16 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0238 Apr-Chr1 2602852 2604866 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0238 14 458 Cytochrome P450 AT3G48280 43.049 9.65e-134 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0238 - - lang:109326078 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0238 1 2602852 2604866 Apr1g0238 1 2602852 2604866 ECH