Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0236 ATGGCTCTTCAACTACCGTCGCTTCTACCACAATTACTGAACACCCTAAACCCAACGCATTACTTAGCCGTTTTCTTCTCTTTCATAAGCCTTCTGTTTATGCTTAATAAACACACAAGAAAAAACAAGTCTAATTTGCCTCCTTCCCCATCAAAACTACCCATAATTGGCAATCTTCATCAACTAGGCACACTTCCCCACCGTTCCTTTCACGCACTCTCACGCAAGTATGGCCCTATCATGATGCTTCAACTGGGCCAAACTCCAACCCTTGTGGTCTCATCCGTTGATGTGGCCAAAGAAATATATAAAACTCACGATGTCGCTTTCTCCAACAAGCCTCAAACCACAGCGGTGAAAATCATCATGTATGGGTGCATGGACGTTGCTTTTGCACCCTATGGAGAAGAGTGGAGACAGAAAAGGAAAATATGTGTCCTTGAGCTTCTAAGCCTTAAAAGGGTACGTTCCTTTCAATCGATAAGAGACGAAGAAATTGCGGAAATGCTTGATACCATTCGTGAAGCATGTGGAAGCAAAAGGTCCTGTGTGAATCTTAGTGAGATGTTGATTGAAACCTCAAACAACATAATGTCTAGATGTGTTCTTGGACAAAAGTATGATACTCCAGAAGGTGGCGAAAGCTTTGGAGAGCTAGGAAGGAAAATGATGAAACACTTAGCAACTTACAGTGTGGGGGATTTCTTTCCTTGGTTAGGTTGGGTTGATGTTCTTACAGGTCAAATAGCAGAATTTAAATCCACTTTCTGTGCATTAGATGGTTTCTTTGAACAGTTAGTCGTACAACGCAAGAGAATGAACAGGGGTGATGGCCAATCTGATAACAAAGACTTCGTGGACATACTCCTTCAAATTCAAGAGGGTAGAAAACATGATTTTCAGCTCACCCATAATGACGTCAAAGCGATTTTAATGGACATATTTGCCGGAGGCAGTGACACTACTTCAACACTTCTGGAGTGGATATTTGCGGCTCTGTTGAGGAATCCAGATACCATGAAGAAAGCCCAAGAGGAAGTAAGAAGAGTTGTGGGGCATAAATCTCAAATAGACGAAAACGATTTGAACCAAATGAACTACTTAAAATGTGTGATAAAAGAAACTTTAAGATTGTATCCACCTGCCCCTCTTCTGATACCACGAGAAACTTCATCAGATGTGAAAGTAAAAGGGTTTGATATTCCATCCAAAACAAGAGTGTTTGTGAATGCATGGGCAATTCAGAGAGACCCTGAAATTTGGGACAGGCCTGAAGAGTTTCTTCCTGAAAGATTTGAAAAACTACCAGAAGTTGATTTTAGAGGACAAGATTTGCAGCTTATACCCTTTGGTTCTGGGAGAAGAGGTTGCATTGGAATTTCATTTGCGCTTACTTCCACTGAGTATATGCTTGCTAATCTCCTCTATTGGTTCGATTGGAAGCTTCCTGAGAGTGTATCTGCCCAAGATGTAGACATGGGCGAGATATGGGGTCTCACTGTCATCAAGAAAGTACCTATTCATCTTCAACCTACTCTGCACTCATTTGGATCTAAAAATTCACGTGTCATGTGA 1575 0.4146 MALQLPSLLPQLLNTLNPTHYLAVFFSFISLLFMLNKHTRKNKSNLPPSPSKLPIIGNLHQLGTLPHRSFHALSRKYGPIMMLQLGQTPTLVVSSVDVAKEIYKTHDVAFSNKPQTTAVKIIMYGCMDVAFAPYGEEWRQKRKICVLELLSLKRVRSFQSIRDEEIAEMLDTIREACGSKRSCVNLSEMLIETSNNIMSRCVLGQKYDTPEGGESFGELGRKMMKHLATYSVGDFFPWLGWVDVLTGQIAEFKSTFCALDGFFEQLVVQRKRMNRGDGQSDNKDFVDILLQIQEGRKHDFQLTHNDVKAILMDIFAGGSDTTSTLLEWIFAALLRNPDTMKKAQEEVRRVVGHKSQIDENDLNQMNYLKCVIKETLRLYPPAPLLIPRETSSDVKVKGFDIPSKTRVFVNAWAIQRDPEIWDRPEEFLPERFEKLPEVDFRGQDLQLIPFGSGRRGCIGISFALTSTEYMLANLLYWFDWKLPESVSAQDVDMGEIWGLTVIKKVPIHLQPTLHSFGSKNSRVM* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0236 524 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 18 513 - -
Apr1g0236 524 PANTHER CYTOCHROME P450 71B11-RELATED 18 513 - -
Apr1g0236 524 Pfam Cytochrome P450 47 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Apr1g0236 524 SUPERFAMILY Cytochrome P450 47 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0236 524 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0236 Apr-Chr1 2577462 2579443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0236 28 508 Cytochrome P450 AT3G48280 45.342 2.24e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0236 K20617 - gmx:100792382 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0236 1 2577462 2579443 Apr1g0236 1 2577462 2579443 ECH