Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0234 ATGAAAGATATTAAAGTTCTCAAAGAATTAGTGGCAAATATTTCAGATTCAGAGACACGTCAAAAGATGTCTCATAAACCTTTTACCCCTTCTTTTTTAGATGTGATAATATCACAAGATTCACCACAATTATACAACGAAGAAGAGATGATTCAAGTAATGAAGTTGTATAAATTCCTTCCAAGGGTTAGAACAAGGTCAGAGACAGTGAATACCAAGAAGACGACTAAGAAAAGGTGCAGAAAAAATGAAGACGTGGCTGAAGAGAAGAGAGTTACGAAAAAACCAAAAGATACAATCATTCCACATCATGGACCCTCACCCAACTTGCCTGAAAATTTCAAGAATGGAATCATTGAGTTGAATGGATATGATATTAAGTTTCTCATGCACAAGAAGCTCTTCCTGTCAGATTTGAGTTCAAATAGTAATCGTTTGTCAATGCCGCTGACGGAATTTATGTGCGATTTTCTCACAGAAGATGAGAAGTCAACATTGGGTGAAAGAGAAGGTAGAAAGGGACGAATTCGTGGTTTGGAAGTGACTGTGTTGGACCCATGTCTTAGAGAATTTACTTTATTATTGAAAAAATGGACAATGAAGACAACAAGCATTTACAATCTAGTAAAGAATTGGAAAGATGTTGTATCTGTTAATAAGTTGAAAGAAGACGATGAACTCCAAATATGGTCTTTTAGGGTCCAAAGCAAGTTATATTTTCTGCTGAACAAACTTTGA 738 0.3537 MKDIKVLKELVANISDSETRQKMSHKPFTPSFLDVIISQDSPQLYNEEEMIQVMKLYKFLPRVRTRSETVNTKKTTKKRCRKNEDVAEEKRVTKKPKDTIIPHHGPSPNLPENFKNGIIELNGYDIKFLMHKKLFLSDLSSNSNRLSMPLTEFMCDFLTEDEKSTLGEREGRKGRIRGLEVTVLDPCLREFTLLLKKWTMKTTSIYNLVKNWKDVVSVNKLKEDDELQIWSFRVQSKLYFLLNKL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0234 245 PANTHER DUF313 DOMAIN PROTEIN 2 243 - -
Apr1g0234 245 Gene3D - 120 244 IPR015300 -
Apr1g0234 245 MobiDBLite consensus disorder prediction 68 101 - -
Apr1g0234 245 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 243 IPR005508 GO:0003677
Apr1g0234 245 MobiDBLite consensus disorder prediction 68 111 - -
Apr1g0234 245 Pfam B3 domain-containing protein At2g31720-like 120 217 IPR005508 GO:0003677
Apr1g0234 245 SUPERFAMILY DNA-binding pseudobarrel domain 129 240 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0234 Apr-Chr1 2548904 2549641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0234 120 244 B3 DNA Binding Superfamily AT1G05930 27.559 5.64e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0234 - - gmx:102663171 256.529