Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0224 ATGCAGTTATATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCATTGGAGGAAAAAGGCATTGATTATACATCTTTCCATGTCAATCCCATAACTGGCAAGAACTTGGATTCTTTATTCTTCAAGATGAATCCCACTGGAAGACTTCCTGTTTTCCAAAATGGATCTCACATCCTTTACAAGACTATAGATATAATCCAGTACATAGAAAGAGTTGCTGTTTTCTCATCAGGGTCTGAGAATATCACTACCAGCAGCAGGGAAGTAATTGAATGGATGCAGAAGATACAAGAGTGGGATCCTAAGTATTTTTCCCTTTCACATATACCAGAGAAATACCGGATTTATGTTTCCAAGTTCAGAAGGAGGGTTGTGATTGCTAGAATGTCTGAGTCTCCTGAATTAGCAGGTGCATACCATAGGAAGTTAAAAGAAGCCTACCGAACAGAAGAAAAGTTGAAAGAGGCAGATGTTTTGAGTAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCAGAGAGACAGCTGAGTGAAACACCTTATTTAGCAGGTCAAGAGTTTAGCATGGCTGATGTGATGCTCATTCCGGTGTTGGCTCGTTTAGTACTCTTAGATTTAGAGCATGAGTACATAACTGGCAGGCCAAACATTGCTGAGTATTGGGTTTTTGTTCAGCAGAGGCCTAGTTATAGAAAGGTGATTGGTAGGTATTTTGATGGTTGGAGAAAGCACAAAACATTGTTGAAAACTTGGTGCTTTGTTCGTATTAGAAGTTTGCTGAAGAGGTACTAG 804 0.4017 MQLYHHPFDLDSQKVRLALEEKGIDYTSFHVNPITGKNLDSLFFKMNPTGRLPVFQNGSHILYKTIDIIQYIERVAVFSSGSENITTSSREVIEWMQKIQEWDPKYFSLSHIPEKYRIYVSKFRRRVVIARMSESPELAGAYHRKLKEAYRTEEKLKEADVLSRSKEHLIRLLDEAERQLSETPYLAGQEFSMADVMLIPVLARLVLLDLEHEYITGRPNIAEYWVFVQQRPSYRKVIGRYFDGWRKHKTLLKTWCFVRIRSLLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0224 267 CDD GST_N_family 1 73 - -
Apr1g0224 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 120 251 IPR010987 -
Apr1g0224 267 CDD GST_C_family 148 225 - -
Apr1g0224 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Apr1g0224 267 Gene3D - 132 238 - -
Apr1g0224 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Apr1g0224 267 SUPERFAMILY GST C-terminal domain-like 155 239 IPR036282 -
Apr1g0224 267 Pfam Glutathione S-transferase, C-terminal domain 162 224 - -
Apr1g0224 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Apr1g0224 267 Coils Coil 159 179 - -
Apr1g0224 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Apr1g0224 267 Gene3D Glutaredoxin 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0224 Apr-Chr1 2449691 2452261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0224 1 267 Glutathione S-transferase Gene Family AT1G77290 69.288 2.28e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0224 K22077 - gmx:100792543 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0224 1 2449691 2452261 Apr1g0224 1 2449691 2452261 ECH
Apr9g0780 9 14330755 14333177 Apr1g0224 1 2449691 2452261 PCT