Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0201 ATGGGGGATAGGGTGGAAACGCTTGCCAGATTAGCCCAATGGAAAATTGACAGCTTCGGATCTTCTTCTTACAAAAAATCTGAACCATTCAAGGTCGGAATCTGGAACTGGTACTTTTCAATAGTGAGGAATAGCCATAGGTATCTTTACATACATCTTTTCCCAGAACCTTCCCGGGTTTCTAAGGATCATCCACCCCTTGCCCGATTCATTCTTCGTGTCTCCAATGCCGGTTCTTCCCGCAGCTTTCGTATTTCTCCTGTTCAAGAAAGGGTGCTTAGAACGCATGACGACTTCGTCTGGCCTGTGGATACTACTTTTGTTGGTCGCTTCATCATTGATGTTGAGTTCCTAGACCTGAAGATATGCCCTCTTAATGGTGAGGCCAGTTCTATATTGCCATCTGAAGGAAATTTTCAATCCATTGCATCTCGAAATAGTACTCTTCGTTGCCTCTCTCGCATGCTTGATGAGGCCATACATGCTGACCTAACCATTATCACTGCAGATGGTACATTGAAAGCTCACAAGGCAGTTCTGTCCGCAAGTTCTCCAGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCTTCTACAATCCATATAGAAGACATGTCACTTGAATCATGCATGGCTCTTCTAACTTACTTGTATGGAACAATCAAACAAGAAGATTTCTTGAAACACCGGCTTGCATTGCTTGGAGCGGCAAACAAATATGATATTGGTGGTCTCAAGGATTTCTGTGAGGAAAGCCTCCTGGAAGATCTCAACTCTGGAAATGTTCTCGAGATGCTAAATGAGGCTTGGTTTTATCAATTACACAAGTTAAAGAAAGGATGTTTGACGTACTTATTTGAATTTGGTAAGATATATGATATTAAAGAGGATGAACAAAGTAACTTTTTCCAGCATGCTGATAGGGAGCTAATGGTGGAGATGTTTCATGAAGTGCTCTCAATTTCAAACCCAGTATAG 987 0.4184 MGDRVETLARLAQWKIDSFGSSSYKKSEPFKVGIWNWYFSIVRNSHRYLYIHLFPEPSRVSKDHPPLARFILRVSNAGSSRSFRISPVQERVLRTHDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGEASSILPSEGNFQSIASRNSTLRCLSRMLDEAIHADLTIITADGTLKAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLTYLYGTIKQEDFLKHRLALLGAANKYDIGGLKDFCEESLLEDLNSGNVLEMLNEAWFYQLHKLKKGCLTYLFEFGKIYDIKEDEQSNFFQHADRELMVEMFHEVLSISNPV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0201 328 CDD BTB_POZ_ZBTB_KLHL-like 161 243 - -
Apr1g0201 328 SUPERFAMILY POZ domain 147 258 IPR011333 -
Apr1g0201 328 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 1 328 - -
Apr1g0201 328 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Apr1g0201 328 SMART BTB_4 162 260 IPR000210 GO:0005515
Apr1g0201 328 Pfam BTB/POZ domain 155 258 IPR000210 GO:0005515
Apr1g0201 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Apr1g0201 328 Gene3D Potassium Channel Kv1.1; Chain A 138 289 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0201 Apr-Chr1 2225837 2228411 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Apr1g0201 BTB 2.7e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0201 K10523 - gmx:100787262 562.377