LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr1g0194	ATGGCAGAGCGTGTGTTACTCACTCCTTCGCTGCCTTTACTCTCTCCACCGTCTTCAATCAAAATGGCTGTTTTGGGTGGCGCCGCCTCTACTCGCCTCATCCCCTCCGTCACACTCTCCTCCTCTTCTCGTTCTTTCTTCTCGTTCTCATCATCTTCTTCTTCCTCGCTCCAATGCTTTCGCTCCTCTCCTCGCATTTCTCACCTGTTCCTCAACCAGCGAAGAGCAGAGGTTCGTGTTTCGAGTGGAGGATACGGAACGGTGTCTGCGCCGAAGTCCTTAGCGTCTGATCCTGATCAGTTGAAGGGCGCTAGAGAGGATATCAAGGAGCTTCTCAGGACTAAGTTCTGTCATCCTATTTTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGCGGAGCTAATGGTAGCTTAAGATATGAAGTTGAGCTGAAACATGCAGCCAATGCCGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTGTTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCTAAAATCCCTATGAAATATGGTAGAGTGGACGTATCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCTCCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAAGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGAGCAGACCAGATCGCAGTGGTTGGGGCAAGCCTGAGACTAAATATACGAAAGATGGACCAGGAGCACCTGGAGGACAATCCTGGACAGTGCAATGGTTGAAGTTTGATAATTCCTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTACTGGTGTTGCCAACTGATGCTGCTCTTTTTGAAGATCCATCGTTCAAGGTATATGCTGAGAAATATGCTGAAGATGAGGGAGCATTCTTTAAAGATTATGCTGAAGCCCATGCCAAACTCAGCAACCTAGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGATTCTCCAAATGCAGGGGCAGAGCAGTTTGTAGCAGCCAAGTACTCCTCCGGAAAGAGAGAGCTGTCTGAGGCTATGAAGCAGAAGATACGGGCTGAATATGAGGCAATTGGTGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTAAATATCATGATTATTATTGCTGTTTTGGCATTTTTGACATCACTGCTTGGAAACTAG	1311	0.4668	MAERVLLTPSLPLLSPPSSIKMAVLGGAASTRLIPSVTLSSSSRSFFSFSSSSSSSLQCFRSSPRISHLFLNQRRAEVRVSSGGYGTVSAPKSLASDPDQLKGAREDIKELLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRYEVELKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDEGAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDSPNAGAEQFVAAKYSSGKRELSEAMKQKIRAEYEAIGGSPDKPLQSNYFLNIMIIIAVLAFLTSLLGN*	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr1g0194	436	MobiDBLite	consensus disorder prediction	255	287	-	-
	Apr1g0194	436	CDD	ascorbate_peroxidase	89	359	-	-
	Apr1g0194	436	ProSiteProfiles	Plant heme peroxidase family profile.	121	405	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	SUPERFAMILY	Heme-dependent peroxidases	99	357	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	ProSitePatterns	Peroxidases proximal heme-ligand signature.	248	258	IPR019793	-
	Apr1g0194	436	PRINTS	Plant ascorbate peroxidase signature	97	117	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Plant ascorbate peroxidase signature	118	133	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Plant ascorbate peroxidase signature	179	197	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Plant ascorbate peroxidase signature	198	210	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Haem peroxidase superfamily signature	118	132	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Haem peroxidase superfamily signature	180	197	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Haem peroxidase superfamily signature	198	210	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Haem peroxidase superfamily signature	248	263	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PRINTS	Haem peroxidase superfamily signature	288	303	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	Pfam	Peroxidase	105	336	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Apr1g0194	436	PANTHER	L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED	22	436	-	-
	Apr1g0194	436	Gene3D	Peroxidase, domain 2	226	349	-	-
	Apr1g0194	436	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	22	436	IPR044831	GO:0004601\|GO:0034599
	Apr1g0194	436	Gene3D	-	104	357	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr1g0194	Apr-Chr1	2127809	2133863	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr1g0194	121	354	Peroxidase	AT4G36430	27.820	9.59e-18	82.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr1g0194	K00434		-	vvi:100254009	681.019

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr1g0194	1	2127809	2133863	Apr1g0194	1	2127809	2133863	ECH