Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0193 ATGTCGGGTGAGGAGTCACAGAAGAAGGTGTTTGATGGAGAAGCAGCGTCTTTACTTGTGAAGGAGTTGAGAGGAAGCTTTGGCTCTGGAAGGACGCGAAGTTATGAGTGGAGAGTGTCGCAGGTGAAGGCTCTATTGAAGTTGGTGGCTGATAACGAGCAACAGATTGTCGATGCTCTTCGTTCCGACCTCGCTAGACCCCCACTCGAAACCGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCACACTGAAGGAATTGAAAAATTGGATGATGCCAGAAAAGGTCAAAACTTCAATCACAACTTTTCCTTCTGCAGCTGAAATAGTACCTGAACCGCTGGGTGTCGTGTTAGTCATCTCAGCATGGAACTATCCATTTTTGTTGTCTCTTGATCCAGTCGTTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCTGCCACATCGTCACTGTTGGCAAAATTGTTAGAAAAGTACATGGATAACTCCTCTATAAGAGTTGTCGAGGGGGCAGTTGATGAGACAACCGCACTATTGCAGCAAAAGTGGGACAAGATTTTCTATACAGGTAATGGAAGAGTGGGACGCATAGTGATGACTGCTGCTGCGAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATGTCAATTTGCCGGTAGCAGCTAGAAGGATAATTTCAGGCAAGTGGGGATTGAACAATGGACAAGCATGCATTTCTCCAGATTATATAATAACAACAAAAGAATATGCTCCCAAGTTGGTGGATGCTCTAAAGACTGAATTGGAGAACTTTTATGGAAAGAAGCCGTTGGAATCAGAAGATTTGTCCCGCATTGTGAATTCCAACCACTTTGCTCGCTTGAAAAAGCTATTGGATGATGATAAAGTTTCGGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCCCCCACTATTTTATTGGATGTTCCACGAGATTCTCTGATAATGGGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTCAATAAACTGGAAGAAAGCATAGATGTGATCAACTCAGGAACAAAGCCCCTCGCTGCATATTTATTTACAACCAACAAAAAGTTCAAGGAGCACTTCGTAACCACTGTTTCTGCCGGGGGATTGCTTGTCAATGACACAGTCCTACATCTGGTGGTTCATACTTTGCCATTTGGGGGAGTTGGTGAGAGTGGAACGGGTGCATACCATGGGAAATTCTCCTTTGATGCATTTACACACAAAAAAGCAGTACTTTATCGTAGTTTTATAGGTGATGCGTCAATAAGGTACCCACCATACACGAATACAAAGATGAGGTTGATGAAGGCTCTCATTGGTGGTGGTATTCTTAACATATTTCGTGCTCTTTTCGGATGGTCCTAA 1467 0.4342 MSGEESQKKVFDGEAASLLVKELRGSFGSGRTRSYEWRVSQVKALLKLVADNEQQIVDALRSDLARPPLETVVYEIGMFKNSCEVTLKELKNWMMPEKVKTSITTFPSAAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLLEKYMDNSSIRVVEGAVDETTALLQQKWDKIFYTGNGRVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNVNLPVAARRIISGKWGLNNGQACISPDYIITTKEYAPKLVDALKTELENFYGKKPLESEDLSRIVNSNHFARLKKLLDDDKVSGKIVYGGEKDESKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKLEESIDVINSGTKPLAAYLFTTNKKFKEHFVTTVSAGGLLVNDTVLHLVVHTLPFGGVGESGTGAYHGKFSFDAFTHKKAVLYRSFIGDASIRYPPYTNTKMRLMKALIGGGILNIFRALFGWS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0193 488 CDD ALDH_F3FHI 16 447 - -
Apr1g0193 488 SUPERFAMILY ALDH-like 19 461 IPR016161 GO:0016491
Apr1g0193 488 Pfam Aldehyde dehydrogenase family 31 445 IPR015590 GO:0016491
Apr1g0193 488 PIRSF ALDH 3 481 IPR012394 GO:0006081
Apr1g0193 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 443 IPR016162 GO:0016491
Apr1g0193 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 - -
Apr1g0193 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Apr1g0193 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 IPR012394 GO:0006081
Apr1g0193 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0193 Apr-Chr1 2110417 2114965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0193 76 486 Aldehyde Dehydrogenase Gene Family AT1G44170 73.479 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0193 K00128 - gmx:100783726 839.721