Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0177 ATGGACGGCACCGTCACGGAGCTCAGTCCCTCCAGCAACGGCGACACACCGCTGCGCCGCAGTGTCCGCCGAAGGCTTGTCCAATCGACGCTCTTCCCTCACAAGCCACCTGAACCCGTCGAAAAGAACGACAAAGAAGACGAACATGACGAGGATTACTGCGAAGCTGAGAATCACAAGAAGAGGAAGCCGAAACCAAAAACCACTCCTCGAAACAAAGGTTCCAGGAGTGCAACGCCAAAGAAAAATGCATCCGCTAATGGGATTAGGGGCTCAACTTCGCGGCAAGTGTTGACTGATTCTGACCAGGTCAATACACCCATGCCTGATTTGCGGTCAGAGGCCAAATTGTCTGCTGAGGAAAATTCGAGGATTTTTGCAGGGCGGCAAATACATCCATTTTTTTCATTGTGGAAGGCGGGGAAGAAAGTTCAGAACCTGGCTGAATCAGGAAGTAATTTATGTACAACTAAGAGAGAGGATGAAAGGACTACCTGTGGCCCTATTCATGTATTTGAAAGTATTCAGGACAATACCATATCCCTTGACTGGAGAAACTGGACGCTCTTGGAAAATACTACCTGCGTGAATTATGGTCAAGAAAGTTCGAATTCATCTGTTTTGGAGGGTTCAGTTGAATCCTTAAATCTTGACAAGGTTCTTAGTTCTTTGGATCCGATTGGTGCTTCAATTTCTCAGAACGCCTTATCTTCAGATACACTTTCGGAGCATTCAATGTGTCCTCCAATGTGTAAAGATGCTGAAGTGGACTTGGGGGTGGATGAATCCGTTACTTCAACTGTGCAAGCTGGCATTTTTGGAAAGTCAGATACTGAACCGCTGAGTAGATTTCTTCAAGAAAGTATGAGGTCATACTACCATAGTTGTGAAGATAAGGTTGAGGCTGGTTTGTGGACATACAAATACAAGCCAACAAAGGCCATTGAGGTATGTGGTAATGATGAATCTGTGAACTTCTTGCGTGACTGGCTACATCTTTGGCATGAAAGACGTTACAAAAGCAGGAAGGATACCTCCATGCGAGATGCTGAAGTAGATGATGAGGATGATGGTGATTACAACTGTTCTTATAGTGACTACGATTCAGAAGATATAAATGGGGAGGATACCCTGCAGAATGTTCTTTTAATTACAGGACCGATAGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGACATTTTAGAGCTCAATGCATCAGATTGTAGAAATGGGACTGTTGTCAAGCAGTATTTTGGGGATGCCCTTTGTTCACTTGGATTCAAAAGGTTATCAGAACATACTGCAAGTTCACAGAAGAGAACTGCAGAATTGCCACCAGCTCCTGCTTTGGTCAGTGGTCAAGCTGCTGATGAGGTGGTTGAACTGATATCCATATCTGATGAAGCTCCTAGCCATGGTGGTTCATCGCAGAAGTTACTTGGCAAAAATAATTTAGTTGCTTGTGATAAAGTCCAAACTATAATTCTAGTTGAGGATGTGGACATTCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACTGCAAGGGGGCCAATTATATTGACCAGCAATAGTGATAATCCTGGCCTGCCAGATAATTTTGATATGCTCCATGTTTCATTTGTGTTGCCATCACCGAAGGAGTTGCTTTGCCATTTGTACACTGTATGTGTTTGTCTCACAGAAGGAGTCAACATCCATCCTCTTTTACTGAAGAAGTTTATACAGTCTTGTGATGGAGATATCCGAAAATCCATTATGCATCTTCAGTTCTGGTTTCAAAGTAAAAGATTTCGAAAAGATGGAAAAGAACAGACGGGCTATGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAGATACTACCAAAGATAATGCCCTGGAGTTTCCCCTCAGAGATTTCCGAGCTAATTGAGAACGAAATCACCAAATCAGCAAATATAATGGAAGAAAACAATAGAGAGTTAGTTACAGAAGAGTCTCTTCACATAAATGAAAGGCAAAATGATTTAGATGTTCAGTATTTGGAGACTGATTCTATAGAGGCCAAGAAGGTGGAGATGATAAAGAGAAATGGATCTTTAACAGATTACAGCGAGCTTGAAATTCAATACAATGCTATTTCTGAGTTTTCCAACTCTTCTGGATCTCCACTTGCATCCTCTTGGCAAAATGGTCGAAGGAAACTTGTAGTAATGTCCTCTGATTCTGAGGACGAGGATTCAAATAATGGATACCCTGTAGACTCACATGATGCTAATAATAGACAATCCATGAGAGAAAATGATGAATGTCTGCCTGAGTTTCAGTTGAATGGAAACTGTCCCAGCTCATCAGTTCGCAAACTGGTTTGTTCTGAATTGGAGGATTCAGAAGATGAACATTTTAAATATTCAGAAACAGCTGACGATACGTGCTTGAGTGAAATATCTAAATCATATGATGTATCCTGTGTGCCAGAATCAACATTAGTTCCTGAGACTGCAATTGAAAATGGAACAGAGACAATGTCTGGAGCTGTGTCTTCTGGCCATCTTGTCGGTCCTCTGGAGGTTTCTGTGAATAATGAGTTGAAACCATTCACTTTCAGTGTCCGTAGGCGGTTAGCAAAACTGACACAAAATCCAGACTTGCGGGTGGATACTGCAATTCCAGGTTCTTCTCTCAAAGGGGTTCAACGAGATGTTGTAGACAAGAATATGGAAACTACAATTGTCAATGTGATGGATGAGTGCAGTCGTATGGATTTCAAACTAAACTCAACATTTGTACAATCCAATCTATCAATGGAGACAGATATACAAAAATTGTGGACAAACCTTCGGGAGCGTAGAATGGATTCAAGGCAGCAAGCTACCGAAGAACAGCTACATTCTCTTCAAGTTGTTAAACTTGCTAGTGGACTGAGCAATCTATTTTCTGAAGCTGACTTGTTTCATGATCACCAACAAAAACGTGATATTATGGAACCTCCAATTTTCCGTTCTGGTGAAGCCGCATCTAGTTGGTATCATGAGCACGTAATGATGCCCACTGTTGCTGAACATGGGTTTTGCTTTTACGCTAAGCTTATAGCAGATGTAGGATCAAAATTGGGATATGATAACTGGGTTGATTTAACTTCTGAGATATTGGCTTCCACTACTAATATTATGGCGTTGGGAAAATTATCGGAGCAGGATCTCACGAAAAGCAAAGCTATCTTTACTGGAAAGCAATTAGAGTGGAACCCAATAAATGAAATGCAGAAGAGTGAAACCAAAACATCTCTGTTCAAGGCGATCCAATCCACTGTTCCTGCAAGAATATCCTTGACATTAAAAGGTGACGTATTCAATGAATATCTATCTTCATTACGCCAAATTTCAAGATCAGAAGCTTTCCGCATTTCACAAGATGTTGAAAAGAAGAGAAGAGGAAGGGCGCGGGGTGGTCATTACTTGAGTAGATGTACAATGTTGTCTCCTGAAGATATATCTTTGATGACTGAGGGTGATTTGTACAGAAAGATCTCTTCTCAACATACAACTGACATAGAAGGCAAATTATAA 3591 0.4172 MDGTVTELSPSSNGDTPLRRSVRRRLVQSTLFPHKPPEPVEKNDKEDEHDEDYCEAENHKKRKPKPKTTPRNKGSRSATPKKNASANGIRGSTSRQVLTDSDQVNTPMPDLRSEAKLSAEENSRIFAGRQIHPFFSLWKAGKKVQNLAESGSNLCTTKREDERTTCGPIHVFESIQDNTISLDWRNWTLLENTTCVNYGQESSNSSVLEGSVESLNLDKVLSSLDPIGASISQNALSSDTLSEHSMCPPMCKDAEVDLGVDESVTSTVQAGIFGKSDTEPLSRFLQESMRSYYHSCEDKVEAGLWTYKYKPTKAIEVCGNDESVNFLRDWLHLWHERRYKSRKDTSMRDAEVDDEDDGDYNCSYSDYDSEDINGEDTLQNVLLITGPIGSGKSAAVYACAQEQGFDILELNASDCRNGTVVKQYFGDALCSLGFKRLSEHTASSQKRTAELPPAPALVSGQAADEVVELISISDEAPSHGGSSQKLLGKNNLVACDKVQTIILVEDVDILFPEDRGCIAAIQQIAETARGPIILTSNSDNPGLPDNFDMLHVSFVLPSPKELLCHLYTVCVCLTEGVNIHPLLLKKFIQSCDGDIRKSIMHLQFWFQSKRFRKDGKEQTGYGSLPFDLELGHQILPKIMPWSFPSEISELIENEITKSANIMEENNRELVTEESLHINERQNDLDVQYLETDSIEAKKVEMIKRNGSLTDYSELEIQYNAISEFSNSSGSPLASSWQNGRRKLVVMSSDSEDEDSNNGYPVDSHDANNRQSMRENDECLPEFQLNGNCPSSSVRKLVCSELEDSEDEHFKYSETADDTCLSEISKSYDVSCVPESTLVPETAIENGTETMSGAVSSGHLVGPLEVSVNNELKPFTFSVRRRLAKLTQNPDLRVDTAIPGSSLKGVQRDVVDKNMETTIVNVMDECSRMDFKLNSTFVQSNLSMETDIQKLWTNLRERRMDSRQQATEEQLHSLQVVKLASGLSNLFSEADLFHDHQQKRDIMEPPIFRSGEAASSWYHEHVMMPTVAEHGFCFYAKLIADVGSKLGYDNWVDLTSEILASTTNIMALGKLSEQDLTKSKAIFTGKQLEWNPINEMQKSETKTSLFKAIQSTVPARISLTLKGDVFNEYLSSLRQISRSEAFRISQDVEKKRRGRARGGHYLSRCTMLSPEDISLMTEGDLYRKISSQHTTDIEGKL* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0177 1196 Gene3D - 557 620 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 746 768 - -
Apr1g0177 1196 Gene3D - 303 547 IPR027417 -
Apr1g0177 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 613 IPR027417 -
Apr1g0177 1196 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 83 1192 IPR004582 GO:0006281
Apr1g0177 1196 MobiDBLite consensus disorder prediction 1 109 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 746 766 - -
Apr1g0177 1196 CDD AAA 382 440 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 344 368 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 350 368 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 37 62 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 71 108 - -
Apr1g0177 1196 MobiDBLite consensus disorder prediction 1 17 - -
Apr1g0177 1196 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 83 1192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0177 Apr-Chr1 1994769 2003231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0177 305 604 Core DNA Replication Machinery Family AT5G22010 21.474 7.49e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0177 - - gmx:100784209 1692.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0177 1 1994769 2003231 Apr1g0177 1 1994769 2003231 ECH