Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0172 ATGGGAACGTTGTTCAATAATGCAAAGCCATATCTGCTGTTGTTGGCCGTCCAATTTGGCTCTGCGGGCATGTTCATTTTTGCGATGGATGCTATCAAAAAGGGGATGAGCCATTATGTGTTTATTGTCTACCGTAATGCCATCGCCTCTATAACTCTCGCTCCCTTCGCATTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTCTGCGGGTATTTTCAGAGATTATGGCACTGGCTTTCTTTGAAATAATACTGGATCAGTGCTTCGCCCTTTTGGGCATGAAATTCACGTCAGCATCTTTCCTATCTGCTGTGATGAACTCCGCACCCTCCATTACTTTTGTCATGGCTGTTATTCTAAGATTGGAGCACATGAAAATTAAGGAGTTAGCATGTCAAGCCAAGGTACTTGGCACAATAGTAACTTTGGGAGGCACCTTGCTAATGGCACTATACAAAGGTCATGCAGTTGTGGGATCTTCAACCAACCACGTAGTCCAGCCTGAGAATGTGAACAACCCCACTAGCAGCCACTGGATCGTAGGGACATGTTTCATCCTCATTGGTTGTGTAGGCTTTTCTGCGTTTTACATATTGCAGACCATAACGTTGAGAAAATACCCAGTAGAGATGTCCTTGGCCACTTTGGTTTGCTTTGTAGGGGCACTTCAAAGCTCTGTTGTAGCAGCCTTGGCAGAGTGGCACCAACCTCATGCATGGTCTCTTGGTTGGGATACAAGACTTTTTGCTCCTGCTTATGCGGGTATAATCACATCTGGAGTCCAATATTACATACAAGGGATGGTCATAAAATCTATGGGCCCAGTTATTGTGACTGCTTTCAATCCCTTGCGTATGATCATCGTCACAGCCTTGGCTTGCATCATTTTATCTGAGCAACTCTACCTTGGAAGTATCATCGGAGCAATAGTTGTGGTTTTTGGGCTTTATCTAGTTGTGTGGGGAAAATCTAAAGAATGCAAAGGTCGGATACCACCGTCCCCTGCAGAGGATGACTTTGCACAAAACCAACGACAGCTACCAGTCACGGCTAAGTTAGTCCCTCATTGTCATCAAAGCAACCATGGGGAGGCCACAATATCAAAATGA 1113 0.4492 MGTLFNNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASITLAPFAFVLERKVRPKMTLRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSITFVMAVILRLEHMKIKELACQAKVLGTIVTLGGTLLMALYKGHAVVGSSTNHVVQPENVNNPTSSHWIVGTCFILIGCVGFSAFYILQTITLRKYPVEMSLATLVCFVGALQSSVVAALAEWHQPHAWSLGWDTRLFAPAYAGIITSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIVTALACIILSEQLYLGSIIGAIVVVFGLYLVVWGKSKECKGRIPPSPAEDDFAQNQRQLPVTAKLVPHCHQSNHGEATISK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0172 370 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Apr1g0172 370 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Apr1g0172 370 PANTHER WAT1-RELATED PROTEIN 7 353 IPR030184 GO:0016021|GO:0022857
Apr1g0172 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 325 - -
Apr1g0172 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Apr1g0172 370 PANTHER WAT1-RELATED PROTEIN 7 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0172 Apr-Chr1 1939663 1943342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0172 9 351 Nodulin-like Gene Family AT2G39510 44.477 8.87e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0172 - - gmx:102665912 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0172 1 1939663 1943342 Apr1g0172 1 1939663 1943342 ECH