Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0171 ATGGGGACGCGGTTCAGAAATGCAAAGCCATATCTGCTGTTATTGGCAGTTCAATTTGGCTCTGCGGGCATGTTCATTTTTGCCATGGATGCTATCAAGAAGGGGATGAGCCATTATGTTTTCATTGTGTATCGTAATGCCATCGCTTCTGTAACTCTCGCTCCCTTCGCATTTGTTCTTGAAAGGAAAGTTAGGCCAAAGATGACTGTGCGGGTATTTTCAGAGATCATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTTGCCCTTTTGGGCATGAAATTCACGTCAGCATCTTTCCTATCTGCTGTGATGAACTCCGCACCCTCCATTACTTTTGTCATGGCTGTTATTCTAAGATTGGAGCACATGAAGATTAATGAGATAGCATGTCAAGCCAAAGTAATTGGCACAGTAATAACTTTCGGAGGCACCTTGTTAATGGCACTGTACAAAGGCCCCGTACTTAGTTTTTTGGGATCATCAACCAACCATGTCGCACAGCCTGAGAACACCAGCAATCCTACAGGCAACCATTGGATCATAGGGACATGTTTCCTCCTCATTGGTTGTGCTGGCTTCTCTGCATTTTACATATTGCAAGCCATAACATTGAGAAAATACCAAGCAGAGATGTCCTTGGCCACTTGGGTTTGCTTCGTAGGTGCACTTCAAAGCTCTGTTGTAGCAGTCTTCGCAGAGTGGCACCAACCTCGTGCTTGGTCCCTTGGTTGGGATACAAGACTTTTCGCTCCTGCTTATGCGGGAATAGTTACATCTGGAGTCCAGTATTACATACAAGGCAAGGTCACAAAAGTTATGGGCCCCGTTATTGTGACTGCTTTTAATCCCTTGCGTATGATCATTGTCTCGGCCTTGGCCTGCATCATCTTATCTGAGCAACTCTACCTTGGAAGCATTATTGGAGCAGTAGTTGTGGTTTTTGGGCTTTATCTAGTTGTGTGGGGAAAATCTAAAGAATGCAAAGGTCGATTGGCACCGTCCCCTACAGAGGATAACTCTACACAGGACCAACAGCAGCTACCGGTAACAGTTCCCAAAAACGATATTAGTGATAGTAATGCTAAAGTAGACCTTCACTGTAATGAAAGAAACGATGTGGTGGCCACAATATCAAAATGA 1149 0.4456 MGTRFRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVTLAPFAFVLERKVRPKMTVRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSITFVMAVILRLEHMKINEIACQAKVIGTVITFGGTLLMALYKGPVLSFLGSSTNHVAQPENTSNPTGNHWIIGTCFLLIGCAGFSAFYILQAITLRKYQAEMSLATWVCFVGALQSSVVAVFAEWHQPRAWSLGWDTRLFAPAYAGIVTSGVQYYIQGKVTKVMGPVIVTAFNPLRMIIVSALACIILSEQLYLGSIIGAVVVVFGLYLVVWGKSKECKGRLAPSPTEDNSTQDQQQLPVTVPKNDISDSNAKVDLHCNERNDVVATISK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0171 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Apr1g0171 382 PANTHER WAT1-RELATED PROTEIN 7 354 IPR030184 GO:0016021|GO:0022857
Apr1g0171 382 MobiDBLite consensus disorder prediction 334 361 - -
Apr1g0171 382 PANTHER WAT1-RELATED PROTEIN 7 354 - -
Apr1g0171 382 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Apr1g0171 382 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Apr1g0171 382 MobiDBLite consensus disorder prediction 337 360 - -
Apr1g0171 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0171 Apr-Chr1 1930414 1934582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0171 6 380 Nodulin-like Gene Family AT2G37460 42.133 8.68e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0171 - - gmx:100811984 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0171 1 1930414 1934582 Apr1g0171 1 1930414 1934582 ECH