Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0170 ATGAAAGCATCATGTTGTGCTAGTTTTGGCACAAGCTTCTATAAGGCAAAGCCTTATTTGTTAACGGTGGGATTGCAATTTGGGTTCGCCGGAGCATACCTCTTCTCCATTGCCAGTCTCAACCATGGAATGAACCGTTTTGTCTTCATTTTCTACCGCAATGCCATAGCTGCACTTGCACTCGCTCCTTTTGCATTCATTTTTGAGAGGAAATTTAGGCCAAAGATGACACTCCGTGTCTTTTTACAGATAATGGCGCTCGGATTTTTGGAGCCAGTGGTTGATCAAGGCTTCACTTTCTTGGGAATGCAATATACGTCTGCTTCATTTGCATCTGCTTTAATGAATGCTGTGCCCTCTCTCACTTTTGTGCTTGCCGTAATTCTAAGGTTAGAGCGTGTAAATATGAAGGAGCTACGTAGCTTAGCGAAGGTGATTGGGACATTGGTAACCTTTGGAGGTGCTTTGTTAGTGACACTCTACAAAGGCCCACAAATCCACCTTTTTTATTCTCCAAACAAAAGTCACCACCAAGAAGCAAGTCACTCCCCTGAGGGTATCCGGCACTGGGTCTCGGGGACTCTCTTTCTACTCTTGGGTTGTGTGGCTTGGTCATCTTTCTTCATTTTACAGTCCTTAACATTGAAAAGGTATCCAGCAGAAATTTCACTCTCCTCTTTGATCTGCTTCGTGGGTGCTTTGCAAGCTGGAGTTGTTGCATTGGTGGCCACGCATCACTCTGGGCCTCAATCATGGGCCTTGGGCTGGGACTTCAGGCTATTCGGCCCCCTCTACACGGGAGTAGTTACCTCAGGAATTACGTACTATGTGCAAGGGTTAGTATTGCAAAGCAGAGGCCCTGTATTTTTAACAGCCTTCAACCCTCTCTGCATGATCATAACTTCTGCTTTAGGCTCCTTCCTTTTTGCAGAGCAACTTCACTTGGGCAGTATCATTGGAGCCATCATTATCGCATTGGGTCTTTACTCAGTGGTGTGGGGTAAAGGCAAAGACTATTCGAACTCCATGCCATCATCACCTACAACAAAGCACACGGAGACACAACAGCTTCCAATGACCTCATCGGATATCTAA 1095 0.4575 MKASCCASFGTSFYKAKPYLLTVGLQFGFAGAYLFSIASLNHGMNRFVFIFYRNAIAALALAPFAFIFERKFRPKMTLRVFLQIMALGFLEPVVDQGFTFLGMQYTSASFASALMNAVPSLTFVLAVILRLERVNMKELRSLAKVIGTLVTFGGALLVTLYKGPQIHLFYSPNKSHHQEASHSPEGIRHWVSGTLFLLLGCVAWSSFFILQSLTLKRYPAEISLSSLICFVGALQAGVVALVATHHSGPQSWALGWDFRLFGPLYTGVVTSGITYYVQGLVLQSRGPVFLTAFNPLCMIITSALGSFLFAEQLHLGSIIGAIIIALGLYSVVWGKGKDYSNSMPSSPTTKHTETQQLPMTSSDI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0170 364 Pfam EamA-like transporter family 192 332 IPR000620 GO:0016020|GO:0016021
Apr1g0170 364 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020|GO:0016021
Apr1g0170 364 PANTHER WAT1-RELATED PROTEIN 12 358 IPR030184 GO:0016021|GO:0022857
Apr1g0170 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Apr1g0170 364 PANTHER WAT1-RELATED PROTEIN 12 358 - -
Apr1g0170 364 MobiDBLite consensus disorder prediction 341 364 - -
Apr1g0170 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0170 Apr-Chr1 1909766 1915905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0170 10 361 Nodulin-like Gene Family AT1G44800 48.580 2.39e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0170 - - gmx:100812537 610.142