Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0169 ATGAGTGCCGTAAATCCGAATGGCAAATTAGGCCTACTTTTTACTAATGCAAAACCATACATCTTAATGATTGGCTTGCAATTTGGCATGGCCGGCAATTACATCTTCGGCAAGGACGTTCTCAACCATGGCATGAATCGTTTTGTGTTCATTGTCTATCGAAATGCCATGGCCACAATTGCCCTTGCCCCTTTCGCATTCATTTTTGAAAGGAAGAGTAGGCCTAAGATGACACTCCCAGTCTTTCTACAGATAATGGTCCTGGGATTCCTGGAGCCAGTTTTCAATCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCGGCTTCATTCACATCTACTATTGTGAACGCTGTGCCCTCTATCACCTTTTTGCTTGCAGTCTTCGTCCGGTTGGAGCGTGTAAAATTAAAGGAAATTCGGAGCCAAGCCAAAGTGATTGGAACATTGGTAACGTTTGGAGGCGCTTTGCTAATGGCAATTTACAAAGGCCCTGCATTCAACCTTTTTCATTCTGGAAGCACAACCCACCAAGACAATGGAAGCCACTCCTCTCCCAATAACCACCAAACCGCTGGAGCCATTTATATACTAATGGGTTGTGTGGCTTTGTCGTCTTTCTACATTTTACAGTCCGTAACGGTGAAAAGATACCCAGCGGAGCTATCATTGGCGACCTTGATATGCCTGGCGGGAACAGTGGAAGGTAGTGTGGTGGCACTGGTGGCTGAGCATCACTCCCGCGCTTGGGCTCTTGGTTGGGATTATAGACTCTATGCTCCTCTTTACACGGGACTAATTAGTTCAGGAATTGCATACTATGTTCAAGGGCTAGTGATGAATATAAGAGGCCCCGTATTTGCAACAGCGTTTAATCCTCTTTGCATGATCATTGTTACTGGTTTGGGCTCTCTTTTATTGGGAGAACAACTCCATCTCGGAAGTATAATTGGAGGCATCGTCATCGCATTGGGCCTTTACTCGGTTGTGTGGGGCAAAGCCAAGGACTATTCAGACTCGAAATTAGCACAAGCAAATGTAGGAGACACAAAGTCACTGCAAATCACCACAAATGATGACTCCAAGATTGATATTATAATTGAGAATTTGGAAAAACAAGCATCAACCAAGCAAAAACTAGAGGAGCCCAACAAAGAGGGAGAAGAAGAAACAGAGAACGGTGTTATGAAGGTTTAG 1197 0.4436 MSAVNPNGKLGLLFTNAKPYILMIGLQFGMAGNYIFGKDVLNHGMNRFVFIVYRNAMATIALAPFAFIFERKSRPKMTLPVFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSTIVNAVPSITFLLAVFVRLERVKLKEIRSQAKVIGTLVTFGGALLMAIYKGPAFNLFHSGSTTHQDNGSHSSPNNHQTAGAIYILMGCVALSSFYILQSVTVKRYPAELSLATLICLAGTVEGSVVALVAEHHSRAWALGWDYRLYAPLYTGLISSGIAYYVQGLVMNIRGPVFATAFNPLCMIIVTGLGSLLLGEQLHLGSIIGGIVIALGLYSVVWGKAKDYSDSKLAQANVGDTKSLQITTNDDSKIDIIIENLEKQASTKQKLEEPNKEGEEETENGVMKV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0169 398 MobiDBLite consensus disorder prediction 375 398 - -
Apr1g0169 398 PANTHER WAT1-RELATED PROTEIN 12 366 IPR030184 GO:0016021|GO:0022857
Apr1g0169 398 PANTHER WAT1-RELATED PROTEIN 12 366 - -
Apr1g0169 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Apr1g0169 398 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Apr1g0169 398 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Apr1g0169 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0169 Apr-Chr1 1876127 1880598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0169 16 382 Nodulin-like Gene Family AT2G37460 47.312 2.00e-122 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0169 - - gmx:100782835 627.091