Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0166 ATGGTTAAGTCAGAGCACAAGATCAAAACAGAACCATCAAAGGCAATGAGATCTTTGGCCTCATCAGATAGCAAGAAGAAGAAGAAGTACAAGGGAGTGAGAATGAGGAGTTGGGGCTCGTGGGTATCGGAGATTAGAGCACCAAACCAAAAAACAAGAATATGGTTAGGCTCTTATTCAACACCAGAGGCAGCAGCTAGAGCCTATGATGCTGCACTTCTTTGTCTTAAAGGTTCTTCAGCAAATCTTAATTTCCCTTCAAGTTCCTCGCAATACATTCCTCAAGACACTGTCATGTCCCCCAAATCAATCCAAAGAGTTGCAGCAGCTGCTGCAAATAGTTTCATTGACAATGCCACCACTCCTGATTCAGCCTCATCATCATCACTGGTCTCATCCCCTTCAATGGTCTCTTCTCCCTCTGATCAAATCGATTATGACGCATCCCTAGTGTCATCTTTTGAGGCCTACACTAGCTGTGATCAAGCAAATGAATCAATGGCTGTGATGGAACCTTGGTATACCTTTGATGGTCTTCAATCCCCGAAGTATGTTGATCACATGTTAAGTGGTGCTTTCTTTGATATTGATTCGTCCCATTTGCTTGATGATCTATATGAAGAAAGTGACATTCGTTTGTGGAGCTTCTGCTGA 654 0.4297 MVKSEHKIKTEPSKAMRSLASSDSKKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSSQYIPQDTVMSPKSIQRVAAAAANSFIDNATTPDSASSSSLVSSPSMVSSPSDQIDYDASLVSSFEAYTSCDQANESMAVMEPWYTFDGLQSPKYVDHMLSGAFFDIDSSHLLDDLYEESDIRLWSFC* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0166 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 13 217 - -
Apr1g0166 217 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Apr1g0166 217 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Apr1g0166 217 MobiDBLite consensus disorder prediction 1 31 - -
Apr1g0166 217 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
Apr1g0166 217 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Apr1g0166 217 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Apr1g0166 217 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Apr1g0166 217 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Apr1g0166 217 CDD AP2 32 88 IPR001471 GO:0003700|GO:0006355
Apr1g0166 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0166 Apr-Chr1 1842762 1843415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0166 1 216 AP2-EREBP Transcription Factor Family AT1G21910 47.773 1.99e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr1g0166 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0166 - - gmx:100819512 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0166 1 1842762 1843415 Apr1g0166 1 1842762 1843415 ECH