Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0149 ATGGATGGGAAGCCTAACCCGGATTCCTCTTCCCCGAACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCTCTCGGTACAATGCAGTCCAATTCCATAAGGCCAAGACGCACTCTTCTTCCTCAACGAAGGGTTTCCAATCCCACTGAATCCAACAACTCTCTAGAAATTTCATCTAAGGACTCAATTTCAGTTCACAGCAACGTCGCTGTTTCTTCTCAAAACCTAGAAGCTCAGAAGAAAGTTCACTTTTCAATTCAAACCAACATTGCTCCGCAGGAAATGGATTGGGTTGAAGGCAACCAACTCGAAGCGTCGTCGTCGCTTGGATTCAACCAAGACTCGAAGCAACAAAATGTTCAGCAGGCAGAGTTTGATGCCAGTTTGAGATCTGATGGTGGAGTAAGTTCTGTTTTGCCGAAGGGAACTGTGGTTATGCAGGATCATCTGCAGCAATTCAGAAGTTTTTTGAGTCAGCCAGCGACGCAATCTTCGGTTATGGGACCTTCTTGTGCTACAACTACCTCGGTTCATTCAACTTCAGCTCCCATGTTAAATTCAACCACCCGTTATTCTTATTTGCATCAAGATGGTGGTTCACGTGTGGCTGCCGAACCTTTGGGGAAGCTTAATGTTAATCCTCATCCTACAACTGAAGTGGTTATGAAATCATTAAATGCTTCAATAAAAGAAATCAATAGAGTTGATCAGGCAGAAGTTGAAGTTCGAGTGGCTGGTCCTGTTATTGATACAGAGTTGGCATCTAAAGAGAGTGATCAATCTAAGGAGCAACAGGGATGGATGTTAAAGGAAACTGGGCATTCCAAATATACTTGTGATGACACTAAAGGGAAAGAACCTGCAGATGATGGCAACATACAAGCGCAGGTTACATTGCCCTCAACTGCATCTTCAGGTGTGAAGTTGGAGCCTTCTAGATTAGAAAAACAAGAGAAGGCTGCAAGTAGTAAAGGTTCATCTACTGCTCGGAAAAGGATGTATGATCCTGATTTGTTTTTTAAAGTCAATGGCAAGCTATATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCAGACTGTAGGATCTATGCACTTAAAAAGATCAAGCTCAAGGGTCGCGATTATGCTACTGCATGTGGGTTTTGTCAAGAGATTGAATATCTAAATAAGCTGAAGGGAAAGGATAACATCATACAGCTTACAGATTATGAGGTGACTGACAAAGCTTTGCTTGAGGAAGTTATGAAAGGATCCTGCGGTAATAAAGATGGCCGGGTCAAGGATGATGGATATATATACATGGTACTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAGCTGGATGGAAACGACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCACGAGGAACGAATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCAAAAGCAATAATGAACGATACAACCAACATCCAACGAGATTCACAGGTGGGTACGCTAAGTTACATGTCTCCAGAGGCATTTATGTGTAATGAGACTGATGCGAATGGAAATGTAATTAAGTGTGGTCGGCCATCAGATATCTGGTCCCTGGGCTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTCTCTGAGTATAAGACATTTTGGGCCAAATTCAAAGTTATAACTGATCCAAATCATGAAATTACGTATGAGCCAGTTTCAAACCCATGGCTTATGGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCCCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTTATCCGTCTTTGTCCCAAGACCATAGCTGTAAACTGCTACAACTCATTGCTGAAACTTGTACATATGACCCGGAAGCATCCCAACTCTGTACTCAGCTCCAGCAGCTTCTTGTTGATCCATTCAAGATAACATCTCCTCACTCACTAAATTCACGAGATCAACAACTAAAACTGCTCTCCCAAATGTCAGAACTCTGTATTCAGCTACAGGATTGTTTGACAAATACTGAAAACAACTAG 2187 0.4271 MDGKPNPDSSSPNFLRHVQAALKRHRPLGTMQSNSIRPRRTLLPQRRVSNPTESNNSLEISSKDSISVHSNVAVSSQNLEAQKKVHFSIQTNIAPQEMDWVEGNQLEASSSLGFNQDSKQQNVQQAEFDASLRSDGGVSSVLPKGTVVMQDHLQQFRSFLSQPATQSSVMGPSCATTTSVHSTSAPMLNSTTRYSYLHQDGGSRVAAEPLGKLNVNPHPTTEVVMKSLNASIKEINRVDQAEVEVRVAGPVIDTELASKESDQSKEQQGWMLKETGHSKYTCDDTKGKEPADDGNIQAQVTLPSTASSGVKLEPSRLEKQEKAASSKGSSTARKRMYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATACGFCQEIEYLNKLKGKDNIIQLTDYEVTDKALLEEVMKGSCGNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGNDQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFMCNETDANGNVIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLMDLMKRCLAWDRNQRWRIPQLLQHPFLVPPVPSYPSLSQDHSCKLLQLIAETCTYDPEASQLCTQLQQLLVDPFKITSPHSLNSRDQQLKLLSQMSELCIQLQDCLTNTENN* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0149 728 MobiDBLite consensus disorder prediction 24 62 - -
Apr1g0149 728 PANTHER MIXED LINEAGE PROTEIN KINASE 5 693 - -
Apr1g0149 728 Pfam Protein kinase domain 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0149 728 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Apr1g0149 728 Gene3D Phosphorylase Kinase; domain 1 343 432 - -
Apr1g0149 728 MobiDBLite consensus disorder prediction 257 332 - -
Apr1g0149 728 SMART serkin_6 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0149 728 SUPERFAMILY Protein kinase-like (PK-like) 344 651 IPR011009 -
Apr1g0149 728 ProSiteProfiles Protein kinase domain profile. 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0149 728 CDD PKc_Mps1 348 643 - -
Apr1g0149 728 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 5 693 IPR027084 GO:0004712|GO:0007093|GO:0051304
Apr1g0149 728 MobiDBLite consensus disorder prediction 277 291 - -
Apr1g0149 728 Gene3D Transferase(Phosphotransferase) domain 1 464 646 - -
Apr1g0149 728 MobiDBLite consensus disorder prediction 28 62 - -
Apr1g0149 728 MobiDBLite consensus disorder prediction 297 311 - -
Apr1g0149 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0149 Apr-Chr1 1686660 1693716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0149 356 644 MAP Kinase Kinase Kinase AT4G08470 28.231 3.57e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Apr1g0149 Pkinase 1.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0149 K08866 - gmx:100788990 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0149 1 1686660 1693716 Apr1g0149 1 1686660 1693716 ECH