Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0143 ATGGCGGCTTCCGTGGACAACCGTCCGTACACTTCCTTCCAACACGGCGTCCTTCGAACCTTCAAGCCAATCCCCGACATACCGCGTCCTAAGAACAAAAAGCTACCCCAACCACTACCACAACCACCCTCCGATTCCTCAAGCGACGACGAAGTTTCCAACTACAACCATCTCATTCAAAAGTCAAGTGCTGAAGTCGAAGCCTCCATCTTCGACCCACGCGACGACGGTACCTCCGACCAATGGATCCAACGGAACGCTTCCCTGCTCCGTCTAACAGGCAAGCACCCCTTCAACTCCGAACCACCCCTCCCTCGCCTCATGCACCATGGCTTCATAACCCCCGTTCCCCTCCATTACGTGCGCAACCATGGGCCCGTTCCCCGGGCCCGCTGGGAAGACTGGACCGTCGAGGTCACGGGCCTAGTGAAACAGCCCACTCGCTTCACCATGGACCAACTGCTCCACGACTTCCCAAGCCGCGAGTTCCCCGCCACACTAGTCTGCGCGGGGAACCGCCGCAAGGAACAGAACATGGTGAAACAGAGCATCGGCTTCAACTGGGGCGCTGCTGCCATCTCCACTTCGGTGTGGCAGGGTGTACCGTTGCGTAGCCTGCTCAAGCGCTGTGGGATTTACAGCCGCACCAAAGGGGCACTCCATGTGTGCTTTGAAGGCGCAGAGGATCTGCCAGGTGGCGGTGGGTCCAAATATGGGACGAGTATCATGAGGGAGGTTGCACTTGATCCCTCCCGCGACATCATCATCGCTTACATGCAAAACGGTGAGCTTTTGACCCCCGATCACGGTTTCCCCGTTAGGATGATAATACCCGGTTTCATTGGTGGCCGCATGGTGAAATGGTTGAAGCGCATCATTGTCACTACCCAGCAATCTGATAGTTATTACCATTACAAGGACAACAGGGTACTCCCCTCTCACGTTGATGCCGAGCTTGCCAATGCAGAAGCTTGGTGGTACAAGCCAGAGTATATTATCAACGAGCTCAACATAAACTCCGTCATAACTACGCCGTGCCACGATGAGGTCTTGCCCATCAACTCCTGGACTACTCAGAGGCCTTATGTACTCAGAGGTTACGCGTATTCCGGAGGTGGGAGAAAGGTAACACGTGTTGAGGTGACCCTGGACGGTGGGGAAACGTGGCAAGTGGGCACCTTAGACTGTCCGGAGAAGCCCAACAAATATGGAAAGTACTGGTGCTGGTGCTTCTGGTCCTTGGAGGTGGGGGTGTTGGACCTGCTTGCTGCCAAAGAAATTGCGGTGCGCGCTTGGGACGAGGCCCTCAACACCCAGCCTCATAACCTCATTTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAAAGTGAAGACAAATGTGTGCAGGCCTCACAAGGGTGAGATTGGGATATCGTTCGAGCACCCCACACAACCAGGTAACCAATCTGGTGGCTGGATGGCAAAAGAAAAACAAATGGAGAAATCATCACACTATAATCCAACTCTAAAAAAGAGTGTTTCCTCACCCTTCATGAACACTTCCTCAAAAACCTTCTCCATCTCCGAAGTCAAAAGGCACAACAACGCCGACTCCGCTTGGATCATCGTTCACGGCAACGTCTACGATTGCACCCGCTTCCTCAAAGACCACCCTGGCGGCACCGACAGCATCCTCATCAATGCCGGCACCGACTCTACCGAAGAGTTCGAAGCCATCCACTCCGACAAAGCCAAAAAATTGCTCGAAGATTACCGAATCGGCGAGCTCATGACCACCGGCTACACCTCTGATTCATCCAATTCATCGCCAAATAACACCGTGCATGGCAATTCTGACACCATCCATTTAGCTCCCATCAAGGAAATTACACCACTTCGCAGCGTGGCGCTTATCCCACGGGAGAAAATCCCATGCAAGCTCCACTCCAAAACGTCCATTTCCCACGACGTTAGGCTCTTCCGTTTTGCGTTACCCTCGGAGGACCAACTCTTGGGTTTGCCAGTAGGGAAACACATATTTTTATGTGCCACCGTGGACGAGAAGCTATGCATGCGAGCTTACACTCCTACTAGTAGCGTAGACGAAGTGGGGTACTTCGATCTAGTCGTCAAAATTTACTTCAAAGGGGTGCACCCAAAGTTCCTAAACGGTGGGCTCATGTCTCAACACTTGGACTCGCTTCCTATTGGCTCTGTCTTGGACGTGAAGGGCCCACTGGGCCACATAGAGTACACTGGTAAAGGCAACTTTGTGGTTCATGGAAAACAAAAGTTTGCCAAGAGGCTAGCCATGCTGGCTGGTGGGACCGGGATCACACCCATTTACCAAGTGGTTCAAGCGATTCTTAAGGACCCTGAGGATCAAACCGAGATGCACGTCGTGTATGCGAACCGAACGGAGGATGATATATTGTTGAGGGAAGAGCTTGATGCGTGGGCTAAGAAGCATGATAGGTTGAAGGTGTGGTACGTGGTACAAGAAAGCATAAGAGAAGGGTGGGAATACAGTGTAGGGTTCATCACGGAGAGTATTTTGAGGGAGCATCTCCCACATCCATCTTCTGATACGTTGGCGTTGACCTGTGGGCCACCACCCATGATTCAGTTCGCAGTGCAGCCGAATTTGGAGAAGTTGGGCTACGACATCAACAACCAATTGCTCTTGTTTTAG 2676 0.5247 MAASVDNRPYTSFQHGVLRTFKPIPDIPRPKNKKLPQPLPQPPSDSSSDDEVSNYNHLIQKSSAEVEASIFDPRDDGTSDQWIQRNASLLRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPRARWEDWTVEVTGLVKQPTRFTMDQLLHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWQGVPLRSLLKRCGIYSRTKGALHVCFEGAEDLPGGGGSKYGTSIMREVALDPSRDIIIAYMQNGELLTPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTQQSDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHDEVLPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTLDGGETWQVGTLDCPEKPNKYGKYWCWCFWSLEVGVLDLLAAKEIAVRAWDEALNTQPHNLIWNVMGMMNNCWFKVKTNVCRPHKGEIGISFEHPTQPGNQSGGWMAKEKQMEKSSHYNPTLKKSVSSPFMNTSSKTFSISEVKRHNNADSAWIIVHGNVYDCTRFLKDHPGGTDSILINAGTDSTEEFEAIHSDKAKKLLEDYRIGELMTTGYTSDSSNSSPNNTVHGNSDTIHLAPIKEITPLRSVALIPREKIPCKLHSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCATVDEKLCMRAYTPTSSVDEVGYFDLVVKIYFKGVHPKFLNGGLMSQHLDSLPIGSVLDVKGPLGHIEYTGKGNFVVHGKQKFAKRLAMLAGGTGITPIYQVVQAILKDPEDQTEMHVVYANRTEDDILLREELDAWAKKHDRLKVWYVVQESIREGWEYSVGFITESILREHLPHPSSDTLALTCGPPPMIQFAVQPNLEKLGYDINNQLLLF* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0143 891 Gene3D - 742 891 IPR039261 -
Apr1g0143 891 PANTHER NITRATE REDUCTASE 50 891 - -
Apr1g0143 891 PRINTS Cytochrome B5 reductase signature 666 677 - -
Apr1g0143 891 PRINTS Cytochrome B5 reductase signature 687 694 - -
Apr1g0143 891 PRINTS Cytochrome B5 reductase signature 732 746 - -
Apr1g0143 891 PRINTS Cytochrome B5 reductase signature 765 784 - -
Apr1g0143 891 PRINTS Cytochrome B5 reductase signature 803 814 - -
Apr1g0143 891 PRINTS Cytochrome B5 reductase signature 859 867 - -
Apr1g0143 891 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 734 886 IPR039261 -
Apr1g0143 891 SUPERFAMILY E set domains 335 462 IPR014756 -
Apr1g0143 891 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 635 747 IPR017927 GO:0016491
Apr1g0143 891 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 515 595 IPR036400 -
Apr1g0143 891 Gene3D - 512 595 IPR036400 -
Apr1g0143 891 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 73 333 IPR036374 -
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 551 561 IPR001709 GO:0016491
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 687 694 IPR001709 GO:0016491
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 765 784 IPR001709 GO:0016491
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 791 800 IPR001709 GO:0016491
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 803 814 IPR001709 GO:0016491
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 835 851 IPR001709 GO:0016491
Apr1g0143 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 859 867 IPR001709 GO:0016491
Apr1g0143 891 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 141 176 IPR022407 GO:0043546
Apr1g0143 891 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 548 555 IPR018506 GO:0020037
Apr1g0143 891 CDD cyt_b5_reduct_like 640 890 - -
Apr1g0143 891 Gene3D Translation factors 628 741 - -
Apr1g0143 891 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 517 592 IPR001199 -
Apr1g0143 891 Pfam Oxidoreductase NAD-binding domain 766 873 IPR001433 GO:0016491
Apr1g0143 891 Pfam Mo-co oxidoreductase dimerisation domain 331 462 IPR005066 GO:0016491|GO:0030151
Apr1g0143 891 Gene3D - 335 510 - -
Apr1g0143 891 Pfam Cytochrome b5-like Heme/Steroid binding domain 523 591 IPR001199 -
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 90 104 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 112 128 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 165 176 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 176 188 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 191 206 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 249 265 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 266 279 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 282 295 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 333 345 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 364 378 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 378 390 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 405 415 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 430 442 IPR008335 GO:0016491
Apr1g0143 891 PRINTS Eukaryotic molybdopterin domain signature 443 456 IPR008335 GO:0016491
Apr1g0143 891 Gene3D - 74 325 IPR036374 -
Apr1g0143 891 Pfam Oxidoreductase molybdopterin binding domain 124 303 IPR000572 -
Apr1g0143 891 MobiDBLite consensus disorder prediction 473 492 - -
Apr1g0143 891 SMART Cyt_b5_2 520 592 IPR001199 -
Apr1g0143 891 CDD eukary_NR_Moco 75 460 - -
Apr1g0143 891 Pfam Oxidoreductase FAD-binding domain 640 746 IPR008333 -
Apr1g0143 891 SUPERFAMILY Riboflavin synthase domain-like 629 748 IPR017938 -
Apr1g0143 891 PRINTS Cytochrome B5 signature 542 552 IPR001199 -
Apr1g0143 891 PRINTS Cytochrome B5 signature 552 566 IPR001199 -
Apr1g0143 891 PRINTS Cytochrome B5 signature 567 574 IPR001199 -
Apr1g0143 891 PRINTS Cytochrome B5 signature 579 591 IPR001199 -
Apr1g0143 891 MobiDBLite consensus disorder prediction 15 52 - -
Apr1g0143 891 PIRSF Nitr_rd_NADH 15 890 IPR012137 GO:0006809|GO:0042128|GO:0050464
Apr1g0143 891 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 891 IPR001834 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0143 Apr-Chr1 1609346 1614867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0143 628 888 NADPH P450 reductases AT5G17770 40.530 4.41e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0143 K10534 - gmx:732634 1582.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0143 1 1609346 1614867 Apr1g0143 1 1609346 1614867 ECH