Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0076 ATGGCGAGCAGAAGCTGTACCCATGAAAATGTTGGCAAGCCAATTAGATGCAAAGCTGCAATATGCAGAAAAGCAGGTGAACCTCTTGTCATAGAAGAAGTTGAGTTAGATCCACCCAAAGCCTGGGAAGTCCGAATCAAGATTTTCTGCACTTCCCTGTGTCACTCTGATGGGCCGGCTGCTAAGTTTCCAAGAATTTTGGGACACGAAGCTGTGGGGGAAGTAGAGAGCGTGGGGGAACACGTGGAAGAGGTTAAAGAGGGGGACATAGTGGTGCCAGTGTTCTTACCTCACTGTGGAGAGTGCAGAGATTGCAAAAGCCCAAAAAGCAACGTTTGCTCCAAGTTCGGGTCACAACGGGATCATTGCATGCCCAGAGACGGAACGAGCAGGTTTAGGGACATGAACGGAGAAGCTTTGCAAAATCTTTTCAGTGTTAGCAGTTTCTCTGAATACACCGTCGTTGATGTGACCCAAGTCGTCAAAATTAGTCCTCAGCTTCCTGTTGAAAAGGCTTGCTTGCTTAGTTGCGGAGTTTCCACAGGGGTGGGGGCAGCATGGAAGGTGGCTGACGTAGAAGAAGGTGCTACAGTGGCTATTTTTGGGCTTGGTACCGTAGGCCTAGCTGTTGCTTTAGGAGCAAAGCAACGAGGAGCGTCAAAGATCATAGGCGTCGATTTAAATAACGAAAAATTTGAAATTGGTAAACGATTTGGAATCACCGATTTTGTGAATCCCTCCACTTGCAAGGAGAAGTCAGTGAGCGAGGTGATTAAAGAAATGACAAATGGAGGTGCTGATTATTGCTTCGAGTGCATAGGCTTGGCTTCGTTAATGGCGGACGCTTTTAATTGCAGCCGAGATGGTTGGGGGAAAACGGTTGTATTAGGGGTGGAAATGCACGGCTCGCCACTGACTTTGAGTCCTTATCACCTAATAAGAGGCAGAACTATAATCGGATCACTATTTGGAGGCATCAAACCCAAATTTGATATTCCCTTCTTCGCAAAAAAGTACTTTGACAAAGAACTTAGCTTAGATGGCTTTGTATCGCATGAAGTGGGGTTTGAGGACATCAACAGAGCTTTTGATTATCTCTTGGAAGGAAAGGGCCTCCGCTGCATTATAAGGATGAATCATTAG 1143 0.4628 MASRSCTHENVGKPIRCKAAICRKAGEPLVIEEVELDPPKAWEVRIKIFCTSLCHSDGPAAKFPRILGHEAVGEVESVGEHVEEVKEGDIVVPVFLPHCGECRDCKSPKSNVCSKFGSQRDHCMPRDGTSRFRDMNGEALQNLFSVSSFSEYTVVDVTQVVKISPQLPVEKACLLSCGVSTGVGAAWKVADVEEGATVAIFGLGTVGLAVALGAKQRGASKIIGVDLNNEKFEIGKRFGITDFVNPSTCKEKSVSEVIKEMTNGGADYCFECIGLASLMADAFNCSRDGWGKTVVLGVEMHGSPLTLSPYHLIRGRTIIGSLFGGIKPKFDIPFFAKKYFDKELSLDGFVSHEVGFEDINRAFDYLLEGKGLRCIIRMNH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0076 380 Gene3D - 21 374 - -
Apr1g0076 380 PANTHER ALCOHOL DEHYDROGENASE 8 378 - -
Apr1g0076 380 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 8 378 - -
Apr1g0076 380 Pfam Zinc-binding dehydrogenase 206 327 IPR013149 -
Apr1g0076 380 Pfam Alcohol dehydrogenase GroES-like domain 43 163 IPR013154 -
Apr1g0076 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Apr1g0076 380 SUPERFAMILY GroES-like 11 187 IPR011032 -
Apr1g0076 380 SUPERFAMILY GroES-like 330 377 IPR011032 -
Apr1g0076 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 341 IPR036291 -
Apr1g0076 380 Gene3D - 182 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0076 Apr-Chr1 874511 878324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0076 43 366 Monolignol Biosynthesis Gene Families AT2G21730 25.672 2.56e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0076 K00121 - qsu:112023922 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0076 1 874511 878324 Apr1g0076 1 874511 878324 ECH