Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0060 ATGGTTGATCAGGTCCAACATCATCCTAGAATCGTTGAGAAGATTGCAGGCCAACTGCATCTTCGTTCCAGCCTTCATTCGTATAACCAGAGGTGCTCATTTGGGAATTACTCAAATGCTGCATTGCAAAATCCGTTGATGCCAACATGGAGAGCTAAAAGTGATGTGTATAGTGTTGCAACAACAGTCTCTCCTGTCTTTGTTGCAGCTCCAGCTGAGAAGGGACATTTCCTTATTGACTTCCTCATGGGTGGAGTTTCAGCTGCTGTGTCCAAAACTGCTGCTGCTCCCATAGAACGTGTTAAACTCTTGATACAGAATCAGGATGAGATGATCAAAGCTGGTAGACTTTCTGAGCCTTATAAGGGTATTGGTGATTGTTTCAAGAGAACAATGCAAGAAGAGGGAGTTGTTTCCTTGTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTAAACTTTGCATTCAAGGACTATTTCAAGAGACTTTTCAACTTCAAGAAAGATAAGGATGGTTATTGGAAATGGTTTGCCGGTAATCTGGCCTCGGGTGGTGCGGCTGGTGCTTCGTCTCTTTTGTTTGTGTATTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGATGCAAAGGCTGCGAAGAAGGGTGGAGAAAGGCAATTCAACGGTCTTGTTGATGTGTACAAGAAGACATTGGCTTCTGATGGTGTTGCTGGTCTTTACCGTGGTTTCAACATCTCTTGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCCTCAAGCCAGTTCTCCTTGTTGGATCTTTGCAGGATAGCTTTTTCGCTAGCTTTGCACTTGGATGGCTCATCACCAATGGTGCAGGTTTAGCATCATACCCAATCGACACTGTTAGAAGAAGGATGATGATGACATCCGGGGAAGCTGTCAAATATAAGAGCTCCATGGATGCATTTTCACAAATCCTCAAGAACGAGGGTGCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAAGTGATAGTGTTTGGAAAGAAGTATGGATCCGGTGGTGCTTAA 1134 0.448 MVDQVQHHPRIVEKIAGQLHLRSSLHSYNQRCSFGNYSNAALQNPLMPTWRAKSDVYSVATTVSPVFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLVGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0060 377 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 377 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr1g0060 377 Gene3D Mitochondrial carrier domain 78 373 IPR023395 -
Apr1g0060 377 PRINTS Adenine nucleotide translocator signature 77 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr1g0060 377 PRINTS Adenine nucleotide translocator signature 121 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr1g0060 377 PRINTS Adenine nucleotide translocator signature 154 166 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr1g0060 377 PRINTS Adenine nucleotide translocator signature 180 193 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr1g0060 377 PRINTS Adenine nucleotide translocator signature 285 301 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr1g0060 377 Pfam Mitochondrial carrier protein 281 366 IPR018108 -
Apr1g0060 377 Pfam Mitochondrial carrier protein 179 273 IPR018108 -
Apr1g0060 377 Pfam Mitochondrial carrier protein 76 172 IPR018108 -
Apr1g0060 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 272 IPR018108 -
Apr1g0060 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 366 IPR018108 -
Apr1g0060 377 PRINTS Mitochondrial carrier protein signature 80 93 IPR002067 GO:0055085
Apr1g0060 377 PRINTS Mitochondrial carrier protein signature 93 107 IPR002067 GO:0055085
Apr1g0060 377 PRINTS Mitochondrial carrier protein signature 143 163 IPR002067 GO:0055085
Apr1g0060 377 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
Apr1g0060 377 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Apr1g0060 377 PRINTS Mitochondrial carrier protein signature 289 311 IPR002067 GO:0055085
Apr1g0060 377 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 377 - -
Apr1g0060 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 168 IPR018108 -
Apr1g0060 377 SUPERFAMILY Mitochondrial carrier 76 362 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0060 Apr-Chr1 692212 693691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0060 1 377 Antiporters AT5G13490 79.949 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0060 K05863 - gmx:100793257 650.973