Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0049 ATGACAGAGATCAATCTTGTGAAGGTCATCAAGGTCAATATGGTGCTAGTAGATGTTGATCCTCTCTTGATAACTTTTAAGGCCAATTTAATTATGGCCACGTTAGAGAATTGTGACAATCCACCCAAGACCATTCTTGTTAGTCAGTCAGGGAAGGCAAATTTCAAAACAATTCAAAGTGCCATCGATTCTGTCCCTTCTGGAAACTCTCAGTGGATTCACATTCTGATTGCTCCTGGCGTTTACAAAGAACACGTCCTAATTCCCATGGACAAACCATGCATTTATCTTGAAGGGGCTGGTAGAAAATCCACCAGTGTTGAATGGGGTGACCCCCTTACACTTAATGCTACTTTGAATGTGAAAGCTAATAACACTGTTGCAAAGGGCATTACTTTCACGAATACACACAACAACCCTGTAATAATGGAGAAAACTAGAATCACACAAGCCAAGGCAGCTCGGATCCATGCAGATAAATGTGTTTTCATCAATTGTGCATTTCTAGGGGTGCAAGACACCCTATATGATTCTTATGGACGACATTACTATTATAATTGCTACATTCAAGGTGGAATCGATTTCATATATGGGAGTGGTCAATCAATCTTTGAGGCAAGTACAATAAATTTTTCAATGGGAAAATCTGGTGTCAAAATAAATGGAGTTTTTACAGCACAAGAAAGGAAGTCACCAAATGATACAAGTGGGTTTGTGTTTAAAAATTGTAACATAACTGGCACAGGAGGAAAGGCTATACTTGGAAGATCCTTGAAGGCTTATGCCAGAGTTATCATAGCCAATTCATTTCTATCAGATGTTGTTTCACCTGAGGGTTGGAGTGCTGTAACCTTTGCTGGTCATGAGTAA 870 0.3943 MTEINLVKVIKVNMVLVDVDPLLITFKANLIMATLENCDNPPKTILVSQSGKANFKTIQSAIDSVPSGNSQWIHILIAPGVYKEHVLIPMDKPCIYLEGAGRKSTSVEWGDPLTLNATLNVKANNTVAKGITFTNTHNNPVIMEKTRITQAKAARIHADKCVFINCAFLGVQDTLYDSYGRHYYYNCYIQGGIDFIYGSGQSIFEASTINFSMGKSGVKINGVFTAQERKSPNDTSGFVFKNCNITGTGGKAILGRSLKAYARVIIANSFLSDVVSPEGWSAVTFAGHE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0049 289 PANTHER PECTINESTERASE 14 289 - -
Apr1g0049 289 SUPERFAMILY Pectin lyase-like 41 282 IPR011050 -
Apr1g0049 289 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 289 - -
Apr1g0049 289 Pfam Pectinesterase 45 282 IPR000070 GO:0030599|GO:0042545
Apr1g0049 289 Gene3D - 25 289 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0049 Apr-Chr1 604881 609146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0049 43 289 Carbohydrate Esterase AT2G19150 46.000 2.53e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0049 - - aprc:113866618 584.719