LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr1g0049	ATGACAGAGATCAATCTTGTGAAGGTCATCAAGGTCAATATGGTGCTAGTAGATGTTGATCCTCTCTTGATAACTTTTAAGGCCAATTTAATTATGGCCACGTTAGAGAATTGTGACAATCCACCCAAGACCATTCTTGTTAGTCAGTCAGGGAAGGCAAATTTCAAAACAATTCAAAGTGCCATCGATTCTGTCCCTTCTGGAAACTCTCAGTGGATTCACATTCTGATTGCTCCTGGCGTTTACAAAGAACACGTCCTAATTCCCATGGACAAACCATGCATTTATCTTGAAGGGGCTGGTAGAAAATCCACCAGTGTTGAATGGGGTGACCCCCTTACACTTAATGCTACTTTGAATGTGAAAGCTAATAACACTGTTGCAAAGGGCATTACTTTCACGAATACACACAACAACCCTGTAATAATGGAGAAAACTAGAATCACACAAGCCAAGGCAGCTCGGATCCATGCAGATAAATGTGTTTTCATCAATTGTGCATTTCTAGGGGTGCAAGACACCCTATATGATTCTTATGGACGACATTACTATTATAATTGCTACATTCAAGGTGGAATCGATTTCATATATGGGAGTGGTCAATCAATCTTTGAGGCAAGTACAATAAATTTTTCAATGGGAAAATCTGGTGTCAAAATAAATGGAGTTTTTACAGCACAAGAAAGGAAGTCACCAAATGATACAAGTGGGTTTGTGTTTAAAAATTGTAACATAACTGGCACAGGAGGAAAGGCTATACTTGGAAGATCCTTGAAGGCTTATGCCAGAGTTATCATAGCCAATTCATTTCTATCAGATGTTGTTTCACCTGAGGGTTGGAGTGCTGTAACCTTTGCTGGTCATGAGTAA	870	0.3943	MTEINLVKVIKVNMVLVDVDPLLITFKANLIMATLENCDNPPKTILVSQSGKANFKTIQSAIDSVPSGNSQWIHILIAPGVYKEHVLIPMDKPCIYLEGAGRKSTSVEWGDPLTLNATLNVKANNTVAKGITFTNTHNNPVIMEKTRITQAKAARIHADKCVFINCAFLGVQDTLYDSYGRHYYYNCYIQGGIDFIYGSGQSIFEASTINFSMGKSGVKINGVFTAQERKSPNDTSGFVFKNCNITGTGGKAILGRSLKAYARVIIANSFLSDVVSPEGWSAVTFAGHE*	290

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr1g0049	289	PANTHER	PECTINESTERASE	14	289	-	-
	Apr1g0049	289	SUPERFAMILY	Pectin lyase-like	41	282	IPR011050	-
	Apr1g0049	289	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	14	289	-	-
	Apr1g0049	289	Pfam	Pectinesterase	45	282	IPR000070	GO:0030599\|GO:0042545
	Apr1g0049	289	Gene3D	-	25	289	IPR012334	-

Showing 1 to 5 of 5 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr1g0049	Apr-Chr1	604881	609146	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr1g0049	43	289	Carbohydrate Esterase	AT2G19150	46.000	2.53e-67	209

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr1g0049	-		-	aprc:113866618	584.719

Showing 1 to 1 of 1 entries