Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0046 ATGAAGAAGCTCTGCGCCACGGAGCTTCTCGTGAGGAAGGAAGAGGTTGAACGTTGCCTCCAAAGGTTGTTGCAAAATGAACGTGGTGGCGTTTCCCTTGACTTGGGCTCTGAGCTCATGAAACTCACCAACAACGTCACTTGCAGGATGGCCATGAGCACCAGTTGTTCGGAGAAATGCGAGGATGGTGAGAAGAAAAGGAAATTGGTGAAGGAATCGTTTGAACTTGCTGCGAAGCTGTGCTTTGGAGATGTGTTGGGTCCTCTGAAGGAGTTGAGCTTTTGGGTTTATGGTAAAAAGGCTTTGGAGGTGAGCAGAAGGTATGATGAGTTATTGGAGGAGGTTCTCAAGGAGCATGAACACAAAAGATTATCAGTTGCAAATGGGAATGGGCATTGCAGTGATGAGAGAGAAAAGGATTTGATGGACATTTTGTTGGATGTTTATCATGATGCTCATGCAGAGTTCAAGATCACAAGGACCCATATTAAAGCCTTCTTTATGGACCTCTTCATTGCAGGCACAGACACCTCAGCAGAAGCAATGCAATGGACAATGGGAGAACTCCTCAACCTTCCTGAAGCATTCCGAAAAGAGATAGTGTTAGTGACTGGGAATGTTAGGGTAGTTGAAGAATCAGATGTGCCAAACATGCCATATTTGCAAGCAGTTGTGAAGGAAACACTGAGACTATACCCACCAGGACCTGTGACAACAAGAGAGTGCCGCCAACACTGCCAAATAAATGGCTTTGATGTGCCACCAAAAACAGCAGTGGCAATCAATTTATATGCCATAATGAGGGATCCAGATTCTTGGGAGGACCCAAATGAATTTCGCCCTGAAAGATTCTTGAAAAAACAATTTGAGGATTTAAGGGATAATTATGATGATTCTAAGACGATGGACTTCAATTTTGTTCCATTTGGAGCAGGAAGGAGAGGGTGTCCAGGGACAATAATGGCATTCAACTTGATGAACACTACAATTGCTGCTTTGGTGCAGTGCTTTGATTGGAAAATTGGTGAAGATGGAAAAGGAGAAAAGGTTGATACGTAA 1059 0.4391 MKKLCATELLVRKEEVERCLQRLLQNERGGVSLDLGSELMKLTNNVTCRMAMSTSCSEKCEDGEKKRKLVKESFELAAKLCFGDVLGPLKELSFWVYGKKALEVSRRYDELLEEVLKEHEHKRLSVANGNGHCSDEREKDLMDILLDVYHDAHAEFKITRTHIKAFFMDLFIAGTDTSAEAMQWTMGELLNLPEAFRKEIVLVTGNVRVVEESDVPNMPYLQAVVKETLRLYPPGPVTTRECRQHCQINGFDVPPKTAVAINLYAIMRDPDSWEDPNEFRPERFLKKQFEDLRDNYDDSKTMDFNFVPFGAGRRGCPGTIMAFNLMNTTIAALVQCFDWKIGEDGKGEKVDT* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0046 352 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 309 318 IPR017972 GO:0005506|GO:0016705
Apr1g0046 352 PRINTS E-class P450 group I signature 162 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PRINTS E-class P450 group I signature 222 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PRINTS E-class P450 group I signature 262 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PRINTS E-class P450 group I signature 306 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PRINTS E-class P450 group I signature 316 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 351 - -
Apr1g0046 352 PRINTS P450 superfamily signature 173 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PRINTS P450 superfamily signature 223 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PRINTS P450 superfamily signature 307 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 Gene3D Cytochrome P450 2 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 Pfam Cytochrome P450 14 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g0046 352 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 1 351 - -
Apr1g0046 352 SUPERFAMILY Cytochrome P450 12 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0046 Apr-Chr1 582926 585494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0046 1 351 Cytochrome P450 AT2G42250 48.352 5.43e-109 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0046 K23814 - gmx:100790065 542.732