Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g0030 | ATGAAAAAGCCCTTGCTACTGTTGACAAAGACCAAGACTAAGACCAACTCAAAGGACACGGTTGTTGGGTTTCAGTCTTGGACTGACACAGAAAATTTTGCTATAAAATATGTTGTTTATGAATCACAGGCATCTCAGAGCACAACAATGGCCTCAATTTCTCTTCATTACTATTGTGTCCTTCTATTTCTTCCTTTGATTTTGTCTGTGTCTAGCATTAACACTAATTCCAAATGTAGTGTAAACTTAAATTCCTCCCTCACCAACGACACATTTACATGGAATTCAGCATCAGGGGAATTCACCTTTGGTTTCCAGAGTGTTTTATTTGATGACAAGGAGTTCATGCTTGTACTTGCTGTTTGGTTTTCCAATGACCCAAACCATACCATAGTATGGTATGCAAAAAATACAAACCAAAACCCTTCATTTCCTCTTGGTTCCACAGTGAACTTGACAAACAAAGGACTTGTTGTATATGACCCAAAAGGCCATAACACCTGGCATCGTCCAGAAAAAGACAATAATGTAATAGTGTCATGTGCTTCTATGTTAGACAACGGAAGTTTTGTGCTTTTTGACAAGGATGGCAAGTTGATTTGGGAAAGCTTTGAAGAGCCCACTGATACTATTCTTCCAGGCCAAAATCTTGCTAATCACCCGAGTTTCAAAGCCCGTCAATCTGACACAAGTTTTTATGATGGAAGTTTTGAGCTCAATTGGCAACGTGATGGCAATTTGGTTCTTTACTATGCACCACAATCAAGTGATCAAACCACTCAGGCTCCCACACTTGAAGCTTATTGGTCCACTGGAACATACATAACAGATTCACAATTGATCTTTGATGAGGTTGGACAAATGTACATAAAAAGTGACACGAGTGAAGTACTAGTCACAAGTGGTGGATCAAAGGAGTTCATGTACATGGCTAGAATTGACCCTGATGGAGTTTTCAGATTCTATTATCACAGGAAAACTGAGAATGTGATTGCTGGAAGTTGTAGGTCAGGGTGGTGGAGTGAGTTGCAACGGTATCCACAAGATATTTGCCTTGCCTTCACCAAGCAAACGGGAAATATTATTTGTGGTTTCAATAGCTATTGTGTTACCATCAATGGGAAGACCAATTGTGAGTGCCCTGAACAATATTCTCCTTTTAAACATGACAATCTCACAGGTTGTAGACCAGATTTTCCACTACCCAATTGCAACCAAGAGGGGTGGGAGCAGAATACAGATCTTGTTGATTTCAAGGAGTATAAAAATTTGGATTGGCCTCTATCTGATTATGACATGCTAACTGGTCCTGCAATGGATAAGGATATGTGTAGACAAAAATGCCTTGAAGATTGCTTCTGTGCAGTAGCCATATATGATGTGGGAAGATGTTGGAAGAAGAAATATCCTTTGAGTAATGGAAGGAAACACCCTAATGTCACTAGGATAGCTCTTGTCAAGGTACCTAAAACAAGTTTGAACAAGGTTGTGAAAAGAAAATCTACTCTAGTGCTTGTTATATCAATACTACTTGGGAGCTCTGTCTTCCTCAATGTCCTTTTGTTTGTTGCTTTGTTTGCAGCTCTTTTATTTTTCTACCACAAGAAGCTTTTGAATCCAAACTTGTCAACTGGAACAACGAGGTGCTTTACTTACAAGGAGCTTGAAGAAGCAACCACAGGCTTCAAACAAATCTTGGGTCGAGGTGCTTTTGGAACGGTATATAAAGGGGTCTTAACATCATATACAAGTAGATATGTTGCTGTTAAAAGGCTTGATAAGGTGGTGCAAGAAGGTGAAAAGGAATTCAAAACAGAAGTGAGTGTGATTGGCCAAACCCACCACAGGAATTTGGTTCGTTTATTTGGTTATTGTGATGAAGGGGACCATCGGCTTCTAGTCTATGAGTACATGAGTAATGGATCACTAGCAAGATTTCTCTTTGGGATTTCAAGGCCTCATTGGAATCAAAGAGTGCAAATTGCTTTGGGAATTGCAAGGGGTCTCACATATTTGCATGAAGAGTGCAGCACCCAAATCATTCACTGTGACATAAAGCCTCAAAACATATTGCTAGATGATTTGTTCACGCCTAGGATTTCTGATTTTGGGTTAGCAAAGTTGTTGTTGGCTGAGCAAACTCAAGCTGCTAAGACAGGTTTAAGAGGAACAATTGGCTATTTTGCACCTGAATGGTTTAGGAAAGGTTCGATCACAACTAAAGTAGATGTTTACAGTTTTGGAGTGATGTTGTTAGAGATCATATGTTGCAAATCAAGTGTTGACTCTGCAATGGCAAACGAAGAAGAGGTGCTCATAGATTGGGCATATCATTGTTATAGCCAAGGAAATGTGGTTAAATTGGTAGAAAATGATGAGGAGGCAAAGAGTGACATAAAGAGGGTGGAAAAGCATGTGATGGTGGCAATTTGGTGTATTCAAGAGGATCCTTCACTAAGACCCTCCATGAAGAAGGTCACCCAAATGCTAGAGGACGTTATCACAATTTCTGTGCCACCTCGTCCTTCCATGTTCAGTTCATCATCGTTTAGAACTTCATTTACCTAG | 2568 | 0.3984 | MKKPLLLLTKTKTKTNSKDTVVGFQSWTDTENFAIKYVVYESQASQSTTMASISLHYYCVLLFLPLILSVSSINTNSKCSVNLNSSLTNDTFTWNSASGEFTFGFQSVLFDDKEFMLVLAVWFSNDPNHTIVWYAKNTNQNPSFPLGSTVNLTNKGLVVYDPKGHNTWHRPEKDNNVIVSCASMLDNGSFVLFDKDGKLIWESFEEPTDTILPGQNLANHPSFKARQSDTSFYDGSFELNWQRDGNLVLYYAPQSSDQTTQAPTLEAYWSTGTYITDSQLIFDEVGQMYIKSDTSEVLVTSGGSKEFMYMARIDPDGVFRFYYHRKTENVIAGSCRSGWWSELQRYPQDICLAFTKQTGNIICGFNSYCVTINGKTNCECPEQYSPFKHDNLTGCRPDFPLPNCNQEGWEQNTDLVDFKEYKNLDWPLSDYDMLTGPAMDKDMCRQKCLEDCFCAVAIYDVGRCWKKKYPLSNGRKHPNVTRIALVKVPKTSLNKVVKRKSTLVLVISILLGSSVFLNVLLFVALFAALLFFYHKKLLNPNLSTGTTRCFTYKELEEATTGFKQILGRGAFGTVYKGVLTSYTSRYVAVKRLDKVVQEGEKEFKTEVSVIGQTHHRNLVRLFGYCDEGDHRLLVYEYMSNGSLARFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDDLFTPRISDFGLAKLLLAEQTQAAKTGLRGTIGYFAPEWFRKGSITTKVDVYSFGVMLLEIICCKSSVDSAMANEEEVLIDWAYHCYSQGNVVKLVENDEEAKSDIKRVEKHVMVAIWCIQEDPSLRPSMKKVTQMLEDVITISVPPRPSMFSSSSFRTSFT* | 856 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g0030 | 855 | CDD | PAN_AP_plant | 410 | 489 | - | - | |
Apr1g0030 | 855 | PIRSF | SRK | 50 | 855 | IPR024171 | GO:0004674 | |
Apr1g0030 | 855 | ProSiteProfiles | Protein kinase domain profile. | 560 | 834 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0030 | 855 | Gene3D | Transferase(Phosphotransferase) domain 1 | 638 | 838 | - | - | |
Apr1g0030 | 855 | PANTHER | - | 55 | 852 | - | - | |
Apr1g0030 | 855 | Pfam | Protein kinase domain | 563 | 828 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0030 | 855 | ProSitePatterns | Protein kinases ATP-binding region signature. | 566 | 590 | IPR017441 | GO:0005524 | |
Apr1g0030 | 855 | Gene3D | Phosphorylase Kinase; domain 1 | 533 | 637 | - | - | |
Apr1g0030 | 855 | SUPERFAMILY | Protein kinase-like (PK-like) | 540 | 830 | IPR011009 | - | |
Apr1g0030 | 855 | SMART | serkin_6 | 560 | 834 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0030 | 855 | Gene3D | - | 74 | 205 | IPR036426 | - | |
Apr1g0030 | 855 | ProSiteProfiles | Bulb-type lectin domain profile. | 83 | 205 | IPR001480 | - | |
Apr1g0030 | 855 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 55 | 852 | - | - | |
Apr1g0030 | 855 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 680 | 692 | IPR008271 | GO:0004672|GO:0006468 | |
Apr1g0030 | 855 | Pfam | D-mannose binding lectin | 130 | 221 | IPR001480 | - | |
Apr1g0030 | 855 | CDD | STKc_IRAK | 566 | 831 | - | - | |
Apr1g0030 | 855 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 118 | 274 | IPR036426 | - | |
Apr1g0030 | 855 | SMART | blect_4 | 78 | 207 | IPR001480 | - | |
Apr1g0030 | 855 | Gene3D | - | 206 | 333 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g0030 | Apr-Chr1 | 385894 | 388535 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g0030 | 530 | 831 | Receptor kinase-like Gene Family | AT1G60800 | 43.548 | 1.34e-71 | 244 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Apr1g0030 | Pkinase | 4.8e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g0030 | - | - | gmx:100796323 | 1229.16 |