Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0030 ATGAAAAAGCCCTTGCTACTGTTGACAAAGACCAAGACTAAGACCAACTCAAAGGACACGGTTGTTGGGTTTCAGTCTTGGACTGACACAGAAAATTTTGCTATAAAATATGTTGTTTATGAATCACAGGCATCTCAGAGCACAACAATGGCCTCAATTTCTCTTCATTACTATTGTGTCCTTCTATTTCTTCCTTTGATTTTGTCTGTGTCTAGCATTAACACTAATTCCAAATGTAGTGTAAACTTAAATTCCTCCCTCACCAACGACACATTTACATGGAATTCAGCATCAGGGGAATTCACCTTTGGTTTCCAGAGTGTTTTATTTGATGACAAGGAGTTCATGCTTGTACTTGCTGTTTGGTTTTCCAATGACCCAAACCATACCATAGTATGGTATGCAAAAAATACAAACCAAAACCCTTCATTTCCTCTTGGTTCCACAGTGAACTTGACAAACAAAGGACTTGTTGTATATGACCCAAAAGGCCATAACACCTGGCATCGTCCAGAAAAAGACAATAATGTAATAGTGTCATGTGCTTCTATGTTAGACAACGGAAGTTTTGTGCTTTTTGACAAGGATGGCAAGTTGATTTGGGAAAGCTTTGAAGAGCCCACTGATACTATTCTTCCAGGCCAAAATCTTGCTAATCACCCGAGTTTCAAAGCCCGTCAATCTGACACAAGTTTTTATGATGGAAGTTTTGAGCTCAATTGGCAACGTGATGGCAATTTGGTTCTTTACTATGCACCACAATCAAGTGATCAAACCACTCAGGCTCCCACACTTGAAGCTTATTGGTCCACTGGAACATACATAACAGATTCACAATTGATCTTTGATGAGGTTGGACAAATGTACATAAAAAGTGACACGAGTGAAGTACTAGTCACAAGTGGTGGATCAAAGGAGTTCATGTACATGGCTAGAATTGACCCTGATGGAGTTTTCAGATTCTATTATCACAGGAAAACTGAGAATGTGATTGCTGGAAGTTGTAGGTCAGGGTGGTGGAGTGAGTTGCAACGGTATCCACAAGATATTTGCCTTGCCTTCACCAAGCAAACGGGAAATATTATTTGTGGTTTCAATAGCTATTGTGTTACCATCAATGGGAAGACCAATTGTGAGTGCCCTGAACAATATTCTCCTTTTAAACATGACAATCTCACAGGTTGTAGACCAGATTTTCCACTACCCAATTGCAACCAAGAGGGGTGGGAGCAGAATACAGATCTTGTTGATTTCAAGGAGTATAAAAATTTGGATTGGCCTCTATCTGATTATGACATGCTAACTGGTCCTGCAATGGATAAGGATATGTGTAGACAAAAATGCCTTGAAGATTGCTTCTGTGCAGTAGCCATATATGATGTGGGAAGATGTTGGAAGAAGAAATATCCTTTGAGTAATGGAAGGAAACACCCTAATGTCACTAGGATAGCTCTTGTCAAGGTACCTAAAACAAGTTTGAACAAGGTTGTGAAAAGAAAATCTACTCTAGTGCTTGTTATATCAATACTACTTGGGAGCTCTGTCTTCCTCAATGTCCTTTTGTTTGTTGCTTTGTTTGCAGCTCTTTTATTTTTCTACCACAAGAAGCTTTTGAATCCAAACTTGTCAACTGGAACAACGAGGTGCTTTACTTACAAGGAGCTTGAAGAAGCAACCACAGGCTTCAAACAAATCTTGGGTCGAGGTGCTTTTGGAACGGTATATAAAGGGGTCTTAACATCATATACAAGTAGATATGTTGCTGTTAAAAGGCTTGATAAGGTGGTGCAAGAAGGTGAAAAGGAATTCAAAACAGAAGTGAGTGTGATTGGCCAAACCCACCACAGGAATTTGGTTCGTTTATTTGGTTATTGTGATGAAGGGGACCATCGGCTTCTAGTCTATGAGTACATGAGTAATGGATCACTAGCAAGATTTCTCTTTGGGATTTCAAGGCCTCATTGGAATCAAAGAGTGCAAATTGCTTTGGGAATTGCAAGGGGTCTCACATATTTGCATGAAGAGTGCAGCACCCAAATCATTCACTGTGACATAAAGCCTCAAAACATATTGCTAGATGATTTGTTCACGCCTAGGATTTCTGATTTTGGGTTAGCAAAGTTGTTGTTGGCTGAGCAAACTCAAGCTGCTAAGACAGGTTTAAGAGGAACAATTGGCTATTTTGCACCTGAATGGTTTAGGAAAGGTTCGATCACAACTAAAGTAGATGTTTACAGTTTTGGAGTGATGTTGTTAGAGATCATATGTTGCAAATCAAGTGTTGACTCTGCAATGGCAAACGAAGAAGAGGTGCTCATAGATTGGGCATATCATTGTTATAGCCAAGGAAATGTGGTTAAATTGGTAGAAAATGATGAGGAGGCAAAGAGTGACATAAAGAGGGTGGAAAAGCATGTGATGGTGGCAATTTGGTGTATTCAAGAGGATCCTTCACTAAGACCCTCCATGAAGAAGGTCACCCAAATGCTAGAGGACGTTATCACAATTTCTGTGCCACCTCGTCCTTCCATGTTCAGTTCATCATCGTTTAGAACTTCATTTACCTAG 2568 0.3984 MKKPLLLLTKTKTKTNSKDTVVGFQSWTDTENFAIKYVVYESQASQSTTMASISLHYYCVLLFLPLILSVSSINTNSKCSVNLNSSLTNDTFTWNSASGEFTFGFQSVLFDDKEFMLVLAVWFSNDPNHTIVWYAKNTNQNPSFPLGSTVNLTNKGLVVYDPKGHNTWHRPEKDNNVIVSCASMLDNGSFVLFDKDGKLIWESFEEPTDTILPGQNLANHPSFKARQSDTSFYDGSFELNWQRDGNLVLYYAPQSSDQTTQAPTLEAYWSTGTYITDSQLIFDEVGQMYIKSDTSEVLVTSGGSKEFMYMARIDPDGVFRFYYHRKTENVIAGSCRSGWWSELQRYPQDICLAFTKQTGNIICGFNSYCVTINGKTNCECPEQYSPFKHDNLTGCRPDFPLPNCNQEGWEQNTDLVDFKEYKNLDWPLSDYDMLTGPAMDKDMCRQKCLEDCFCAVAIYDVGRCWKKKYPLSNGRKHPNVTRIALVKVPKTSLNKVVKRKSTLVLVISILLGSSVFLNVLLFVALFAALLFFYHKKLLNPNLSTGTTRCFTYKELEEATTGFKQILGRGAFGTVYKGVLTSYTSRYVAVKRLDKVVQEGEKEFKTEVSVIGQTHHRNLVRLFGYCDEGDHRLLVYEYMSNGSLARFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDDLFTPRISDFGLAKLLLAEQTQAAKTGLRGTIGYFAPEWFRKGSITTKVDVYSFGVMLLEIICCKSSVDSAMANEEEVLIDWAYHCYSQGNVVKLVENDEEAKSDIKRVEKHVMVAIWCIQEDPSLRPSMKKVTQMLEDVITISVPPRPSMFSSSSFRTSFT* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0030 855 CDD PAN_AP_plant 410 489 - -
Apr1g0030 855 PIRSF SRK 50 855 IPR024171 GO:0004674
Apr1g0030 855 ProSiteProfiles Protein kinase domain profile. 560 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0030 855 Gene3D Transferase(Phosphotransferase) domain 1 638 838 - -
Apr1g0030 855 PANTHER - 55 852 - -
Apr1g0030 855 Pfam Protein kinase domain 563 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0030 855 ProSitePatterns Protein kinases ATP-binding region signature. 566 590 IPR017441 GO:0005524
Apr1g0030 855 Gene3D Phosphorylase Kinase; domain 1 533 637 - -
Apr1g0030 855 SUPERFAMILY Protein kinase-like (PK-like) 540 830 IPR011009 -
Apr1g0030 855 SMART serkin_6 560 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0030 855 Gene3D - 74 205 IPR036426 -
Apr1g0030 855 ProSiteProfiles Bulb-type lectin domain profile. 83 205 IPR001480 -
Apr1g0030 855 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 55 852 - -
Apr1g0030 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Apr1g0030 855 Pfam D-mannose binding lectin 130 221 IPR001480 -
Apr1g0030 855 CDD STKc_IRAK 566 831 - -
Apr1g0030 855 SUPERFAMILY alpha-D-mannose-specific plant lectins 118 274 IPR036426 -
Apr1g0030 855 SMART blect_4 78 207 IPR001480 -
Apr1g0030 855 Gene3D - 206 333 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0030 Apr-Chr1 385894 388535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0030 530 831 Receptor kinase-like Gene Family AT1G60800 43.548 1.34e-71 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr1g0030 Pkinase 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0030 - - gmx:100796323 1229.16