Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0021 ATGGATGCCACTCACACAATGTTTTGTAACAATGATTTGGTTAACCCTCTAAGCTCAATGGGCATGCAAGTGTCATGCATTCTTGTTGTGTCACACTTCTTCAACGTTGTGCTTAGGACTGTGGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGGTTGGTGCTAGGTCCAATGTCACATATTAAGCACATAAAAGAAACATTCTTTCCTGCCAGTTCAATTAATTATTATGAAGTTGTGAGCTTTTTCTGTCGCATACATTTCATGTTTTTATTTGGTTTAGAAATGAATTTTCACTACATCATACGCAATCTACGTATGGTTAGCTTAGTAGCTTGTGGTGGTGCAATAATGGGTGGCGTTTTTGGTCTATCTATCTCCTTTTATTTATATAAACCAATGAAAACCCTTGACAATGCTCCCTTGTATTATTTTTGTATGATCATTATGCTAGTGGTATCATACACAAGCTCCCCTATGGTTATTCGTTTGACAGCAGAGTTGAGATTTGCAGCATCAAATGTTGGGCGAATAGCAGTGTCTTCTGCATTGATCACAGAAATGGGGTGTTTGTTGTTCTTTAATGTGATGGTTAACTGGAAAAGGAAAAATCACATTCCTGCTGGTCTTGGCTGCATTACAATTACTACCTTGGTAGTTTTTATAAACAGGTACTTGGCTGTTTGGTTAAATGCAAGAAATCAAAATCAGAAGTACCTCAAAGCTCCTGAGTTGTTACTCATCCTATTTTTGCTCCTAAGTAGCTCAATGATAATAGAAATTTGGGGTTACAACAGTATTATTAGTTGTTTTATCATTGGCCTATTTTTCCCTAAGGAAGGAAAAACAGCTAGAACATTACTGCATAAACTTGGTTATTCTATTTACAACTTTGTACTTCCAGTATACTTTGGGTATTTGGGTTTACAATGTGACTTAATAAATATCTTCAAGGATTGGGGGCGAGCGGGAAACACAGCCATATTGATTTTGTTGAGCATTGGAAGCAAGCTTGGTGGCACTCTTATAGTTTGTCGTTACCTTCAAATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTAAACACTAGAGGCTATGCTGATCTCCTATTTTTTGGTGCAGCCTCAAAGCAAATAATTGTTAAAGCTTACAATGTGTTGTTAGTATCGGTAGTACTCAACACAATAATATCAGGGATAATTGTGGCTTTTCTAGCAAGAGGGGAAGAGAAAATGTTTGCAAACAACCACACTGCAATTGAACCACAACAAATGGAGGATGAGCTTCGAATTTTGGCTTGTGTATATGATCCTCGTCAAGTATCTGCCATACTAGCCACGGTATTGGCAATACATGGGTCTAAAACATCAGCATCTACCACTTATTTGATACACCTAATAGAGCTTGTGAAGAAGATAAAGTCTAACCTATTATACCATGAAAAAGAAAATGAAGACCTAAGTGACGATGAAGACTATGGTGGGAATGATGTGGTGGAAATCAACAATGCTTTGGATGCCTTCACAACAGACACAAAGATTCTTGTCCACCAAAGAAGAGCTGTGTCCACTTTCCCAAGTTTGTATGAAGATGTTTGCAATGAAGCAGAAGATCTTCAAGTTTCTGTCATTCTAATTCCCTTCCATAAGCATCAACGAATTGATGGAAAATTGGAAAGTGGGAAAGAAGGCATAAGGATCACTAATCAGAAGGTGCTTAGACATGCCCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACTTGCTAGGGTCCCTGGCTTCTCACAACTAGTTTCATCTGACAACATACACAATGTTGCAACACTTTTCTTTGGTGGCCCTGATGATCGTGAGGCTATTGCTTGGAGCCTACGCATTTCAGGAAGTCCTAGAATTAACTTGACAATAATAAGGTTTCTGTTGACTTCTTCATCATCGAATGAACAGATTGAAAGTGGAGAATCTGAGGACAAGGAAATTTTGATGTCTTTGTCTGGTGAAGAGACTGTGAATGAAATTGACAACACCTTCATGGTTGATTTCTACAACAGGTATGTGACTTCTGGTCAAATTGGGTATGTTGAAAAGTTTGTGAGGGATGGAGCACAAACAGTGGAGTCTTTGAAAGAGATAGGGGACATGTACTCTTTATTTATAGTAGGAAAGGGTGGTAGGGGACAAAGTTCATTAACAATTGGTATGAGTGACTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCTGACTTTGATATTCATGGGTCAGTTTTGATTGTTCAACAACACAGAGATGCCAAGAAAGGCCTATTGCATGATTAA 2340 0.3868 MDATHTMFCNNDLVNPLSSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHIKHIKETFFPASSINYYEVVSFFCRIHFMFLFGLEMNFHYIIRNLRMVSLVACGGAIMGGVFGLSISFYLYKPMKTLDNAPLYYFCMIIMLVVSYTSSPMVIRLTAELRFAASNVGRIAVSSALITEMGCLLFFNVMVNWKRKNHIPAGLGCITITTLVVFINRYLAVWLNARNQNQKYLKAPELLLILFLLLSSSMIIEIWGYNSIISCFIIGLFFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINIFKDWGRAGNTAILILLSIGSKLGGTLIVCRYLQIPTSEGIFLGFILNTRGYADLLFFGAASKQIIVKAYNVLLVSVVLNTIISGIIVAFLARGEEKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSKTSASTTYLIHLIELVKKIKSNLLYHEKENEDLSDDEDYGGNDVVEINNALDAFTTDTKILVHQRRAVSTFPSLYEDVCNEAEDLQVSVILIPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLARVPGFSQLVSSDNIHNVATLFFGGPDDREAIAWSLRISGSPRINLTIIRFLLTSSSSNEQIESGESEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVRDGAQTVESLKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDAKKGLLHD* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0021 779 PANTHER CATION/H + ANTIPORTER 21 769 - -
Apr1g0021 779 Pfam Sodium/hydrogen exchanger family 27 408 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr1g0021 779 PANTHER CATION/H(+) ANTIPORTER 1 21 769 - -
Apr1g0021 779 Gene3D - 19 416 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0021 Apr-Chr1 316671 319210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0021 11 779 Antiporter Super Family AT1G79400 38.590 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0021 - - gmx:100804522 1375.53