Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0014 ATGTCGCTGAATATGAAAACCCTAACCCAAGCATTGGCGAAGACCGCAGCGGTGATTGAGAAGACAGTGCAGACAACGGTGCAGGAGGTGACAGGACCCAAGCCACTTCAAGACTACGACCTTCTACACCAGATCGGTTCTGCTGGGCCTGGCCTCGCGTGGAGGCTCTACTCGGCCAGGGCGCGTGATCCCTCGCGTCAGCACCAATACCCGGTTGTATGTGTGTGGGTATTAGACAAACGCGCTCTTTCCGAGGCCCGAATGCGTGCTGGCCTCACCAAAGCCGCTGAGGATTCCTTTTTAGATTTGGTTCGCACCGATGCGGCTAAGCTCGTGCGTCTCAGACATCCTGGGATCGTTCACGTCGTTCAGGCCCTCGACGAGAGCAAGAATGCCATGGCTATGGTCACCGAACCCTTGTTTGCTTCCGTCGCCAATACTCTTGGCAATGTCGACAATATTCCTAATCTTCCTAAAGATCTCAGGGGAATGGAAATGGGACTTTTGGAGGTCAAACATGGTTTACTTCAGATGGCAGAATCCTTGGACTTTCTTCACAACCATGCTCATCTTATTCATCGAGCTTTATCACCCGAGAACATTCTGATCACCTTGAGTGGAGCTTGGAAACTTGCTGGATTTGGTTTTGCCATTTCTGCTACTCAGACCTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTTGAGGACTCTGTTTTGCCACTTCAGCCATCACTTAATTACACTGCTCCTGAACTGGTGAGGAGCACCATGCCTTCAGCTGGGTGCTCATCTGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCTCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGAATTACTTATCCAGTGATGCATTTTCATCTGTCCCATCGGAACTGGTTCCTGACTTGCAAAAGATGCTCTCTACAAATGAGTCTTTCAGGCCAACAGCAATGGATTTTACAGAGGAAGGTCTTGATCATGTCAGATGTGGCACGAGTAATAATTCTACACTTTCACAATTGACTTGCTCACCATTTTTTCGAAATGATACTAGGTTGCGTGCTCTACGCTTCCTTGACCACATGCTTGAAAGAGATAACCTGCAAAAGTCAGAGTTCTTAAAAGCACTGTCAGACATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTGGTGATACAGCCGATGATTCTACCCATGGTTCTCACTATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTCCCAGCCCTTGTCCCTGTCTTGAGTACTGCTGCTGGTGAGACACTGTTGCTACTTGTGAAGCATGCTGAGCTTATAATAAACAAGACTAGTCAAGAGCATTTAGTTTCGCACGTTCTTCCAATGATTGTTCGGGCCTACGATGATACTGATGCTCGTATGCAAGAAGAGGTCCTGAAAAAATCTGTATCCCTTGCCAAACAACTTGATGCCCAGCTGGTGAAACAAGTGATTTTGCCCCGTGTTCATGGATTAGCACTTAAAACAACAGTTGCCGCGGTTAGAGTCAATGCTTTGCTGTGCCTAGGAGACATGGTTAACCGACTTGATAAACATGCTGTCCTGGATATCTTGCAAACTATTCAGCGCTGTACTGCTGTTGACCATTCTCCTCCAACCCTTATGTGTACCTTAGGGGTTGCAAATTCTATTTTTAAGCAGTATGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTATGCCTCTTCTGACTGCTCAACAACTTAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTTCATAAGATAGAAGAGAAGCGAGGAGTGGCTGTGACTGATTCTGGAATCCCGGAGGTAAAACTATCTCCCATGGTTAATGGCCTTCAATCTGAAGCCCTGAGGACAAGCAGCAGCACTGTAGCTGCTTCAACAAAAAGCAGCTCCTCTTGGGATGAAGATTGGGGTCCCAGAACAAAGGGAACTGCCTCTTCTATCCAAAATTCTGTTGATACCACCAGTCAATCTGCGGCAAGCCACCCTGTGGGTCAAGTAACATCCTTACAAAAGCATTTGTCCTTGTCTGCTTTATCTACTCAGCAGACAACCAAGTCATGTCCCTCAGTAGATGTAGAATGGCCGCCTCGTACATCTCTTGGTGTTACCTCACAATTTGGTGACACTGAAAGTCATACAGTAGCAGCAGGAACTTCGTCCACATCTAATCTTGAATCTGATGATCCTTTTGCTGATTGGCCGCCACGTCCTAATAACTCATTATCAGGTGGATCTGGAATATCAAACAATGGTACTTTAGGAATGCCGCTAAACAAGCTTGGGTTTAATTCAATGACGAGCACTTCAAGCAATATGGCTCCCCAAACTACCTACAGTTGGCCTGTTAATTCCCAAAGTTCTGCAGAGTCTATCAGTTTGAACACGAGGAATGCTAGCTCAACCGTTGGTAGCCTGAATAGTGGCCTTGAACCTCAGAATTCTCTTGGGTTCCTAAAGCAAAATAATGCTTTTCCATCATCAAATGTTTCATATAATAATGTTCAGTCAACGGCAACAGATCTTGGATCGATATTTTCCTCCAACAAGAATGAACAGATTGCACCTAAACTTGCACCACCGCCATCAACCACAGTCGGTAGAGGACGAGGAAGAGGGAGGGGAGTGGTTTCAACCACTCGGTCCTCTCAAACCAAGTCACATGTTGAGCAGCCACCCCTTTTGGATTTGTTGGGGTAG 2853 0.4578 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYDLLHQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRALSEARMRAGLTKAAEDSFLDLVRTDAAKLVRLRHPGIVHVVQALDESKNAMAMVTEPLFASVANTLGNVDNIPNLPKDLRGMEMGLLEVKHGLLQMAESLDFLHNHAHLIHRALSPENILITLSGAWKLAGFGFAISATQTSGDSSNLQPFHYAEYDVEDSVLPLQPSLNYTAPELVRSTMPSAGCSSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLNYLSSDAFSSVPSELVPDLQKMLSTNESFRPTAMDFTEEGLDHVRCGTSNNSTLSQLTCSPFFRNDTRLRALRFLDHMLERDNLQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLSTAAGETLLLLVKHAELIINKTSQEHLVSHVLPMIVRAYDDTDARMQEEVLKKSVSLAKQLDAQLVKQVILPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVLDILQTIQRCTAVDHSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGIPEVKLSPMVNGLQSEALRTSSSTVAASTKSSSSWDEDWGPRTKGTASSIQNSVDTTSQSAASHPVGQVTSLQKHLSLSALSTQQTTKSCPSVDVEWPPRTSLGVTSQFGDTESHTVAAGTSSTSNLESDDPFADWPPRPNNSLSGGSGISNNGTLGMPLNKLGFNSMTSTSSNMAPQTTYSWPVNSQSSAESISLNTRNASSTVGSLNSGLEPQNSLGFLKQNNAFPSSNVSYNNVQSTATDLGSIFSSNKNEQIAPKLAPPPSTTVGRGRGRGRGVVSTTRSSQTKSHVEQPPLLDLLG* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0014 950 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 949 - -
Apr1g0014 950 SUPERFAMILY ARM repeat 363 629 IPR016024 -
Apr1g0014 950 MobiDBLite consensus disorder prediction 927 941 - -
Apr1g0014 950 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 949 - -
Apr1g0014 950 MobiDBLite consensus disorder prediction 666 717 - -
Apr1g0014 950 SMART serkin_6 39 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0014 950 CDD PK_SCY1_like 45 339 - -
Apr1g0014 950 MobiDBLite consensus disorder prediction 902 950 - -
Apr1g0014 950 Gene3D Transferase(Phosphotransferase) domain 1 162 368 - -
Apr1g0014 950 ProSiteProfiles Protein kinase domain profile. 39 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0014 950 Pfam Protein kinase domain 104 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0014 950 SUPERFAMILY Protein kinase-like (PK-like) 35 340 IPR011009 -
Apr1g0014 950 MobiDBLite consensus disorder prediction 750 779 - -
Apr1g0014 950 MobiDBLite consensus disorder prediction 732 804 - -
Apr1g0014 950 Gene3D - 369 642 IPR011989 -
Apr1g0014 950 Gene3D Phosphorylase Kinase; domain 1 38 138 - -
Apr1g0014 950 MobiDBLite consensus disorder prediction 790 804 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0014 172 302 MAP Kinase Gene Family AT1G10210 31.343 6.06e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Apr1g0014 Pkinase 8.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0014 K17541 - gmx:100796211 1604.34