Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2373 ATGGGAGAAATAGAAGGAGAGGCAATGTTAGAGCGGGAGAAGGAAGAAGAAGAGGAAGAAGCACAAGCCCAAGTGGATATTTGGAGGTACATATTTGGGTTTGTGGAACTGGCAGTGGTGAAATGTGCCATAGAACTGGGCATAGCTGAAGCCATAGAAGCTCATGGAAGACCCATGACACTGTCGGAGATATCAACAACTCTAGGCTGTGATCCTTCACTTCTGAACCGCATCATGAGGTTCCTCACACACCGAAAGATATTCAAAGCCATACCCACCAGCCATGGCTACCCGGGCTATGCTCAAACACCTTTGTCTCGGCGTTTGATGAAAACGGGACAACATAGCATGGCAGCTTTGATTTTGCTGGAGAGTAGTCCTGTAATGCTAGCACCATGGCATTGCCTAAGTGCTCGTGTCTTGGCCAATGGCAATCCCTCATTTGAAAAGGCTCACGGTGAAGATGTGTGGCGCTATGCTGCGTCAAATCTTGATCACAGCAACCTCATCAATGAAGCAATGGCTTGTGATTCTAAGCTTGTTATGCCTATTATCATTGAAAGTTGCAGCGAGGCATTTGATGGTCTCAACTCCTTGGTGGATGTGGGTGGGGGCAACGGCACCACCATGAGTGTCCTTGTTAAGGCTTGCCCTTGGATTCGAGGAATCACTTTTGATCTTCCTCATGTCATTGCTGAGGCTCCAAAGTGTGATGGGCTGGAACATGTTGCAGGCGACATGTTTCAAAGCGTTCCCAAAGCTGATGCTGCTTTTCTTAAGTGGGTTTTGCACGACTGGGGAGACGAAGAGTGCATCGATATTTTAAAGAAATGCAGGGAAGCTGTTCCAGAGGAAAATGGAAGGGTTATTATTGTGGAGGCAGTGATTGAAGGTGGAAAGCATGATGGGTTGAAGGATGTAGGACTGATGCTGGACATGGTAATGATGGCGCATACTAATTTTGGCAAGGAGCGTACCCTCAAAGAGTGGGAATATGTCATTCAAATGGCAGGATTTAGCAAATGCACTGTGAAAACCATCCATGCCGTGCAGTCTGTCATTATTGCTTTCTACTAA 1077 0.468 MGEIEGEAMLEREKEEEEEEAQAQVDIWRYIFGFVELAVVKCAIELGIAEAIEAHGRPMTLSEISTTLGCDPSLLNRIMRFLTHRKIFKAIPTSHGYPGYAQTPLSRRLMKTGQHSMAALILLESSPVMLAPWHCLSARVLANGNPSFEKAHGEDVWRYAASNLDHSNLINEAMACDSKLVMPIIIESCSEAFDGLNSLVDVGGGNGTTMSVLVKACPWIRGITFDLPHVIAEAPKCDGLEHVAGDMFQSVPKADAAFLKWVLHDWGDEECIDILKKCREAVPEENGRVIIVEAVIEGGKHDGLKDVGLMLDMVMMAHTNFGKERTLKEWEYVIQMAGFSKCTVKTIHAVQSVIIAFY* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2373 358 Pfam Dimerisation domain 39 83 IPR012967 GO:0046983
Apr10g2373 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 355 IPR029063 -
Apr10g2373 358 CDD AdoMet_MTases 199 292 - -
Apr10g2373 358 PANTHER O-METHYLTRANSFERASE 13 357 IPR016461 GO:0008168
Apr10g2373 358 Gene3D Vaccinia Virus protein VP39 111 357 IPR029063 -
Apr10g2373 358 Pfam O-methyltransferase domain 133 340 IPR001077 GO:0008171
Apr10g2373 358 Coils Coil 7 27 - -
Apr10g2373 358 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 13 357 - -
Apr10g2373 358 PIRSF O-mtase 5 358 IPR016461 GO:0008168
Apr10g2373 358 Gene3D - 9 109 IPR036388 -
Apr10g2373 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 358 IPR016461 GO:0008168
Apr10g2373 358 SUPERFAMILY "Winged helix" DNA-binding domain 17 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2373 Apr-Chr10 35493317 35494466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2373 40 344 Monolignol Biosynthesis Gene Families AT5G54160 38.095 4.90e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2373 K22588 - gmx:100782951 530.406