Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2339 ATGGCTCATCCCAAATTAAAACCGAAAACCCTACTCTCTCTCTCTAACTTATTACTCTGTTTCTCTCTCCTCTCCCCTGCCATTGCCGACGATGGCGCCTTCATGTCCAAGCTCGCCAAAGCGCTCAGCCCAACGCCGTCGGGGTGGTCGGGGACTGCGTTCTGCGATTGGACCGGCGTTAAGTGCGACACCAATCGCGTTACTGCAATCAACATTGCTTCAAAGTCACTCACCGGAACACTCCCTTCGGATCTCAACTCACTGTCCCAGCTCTCCACACTCTCGCTCCAGAACAACGCGCTCGCCGGCGCGTTACCTTCCTTCGCGAACCTTACCATGCTTCAAACCGTGTTTCTCGACGGCAACAACTTCACCTCCGTTCCCGCTGGTTGCTTCCAGGGACTCACCAGCTTGCAGATCCTCAGCATGACCGATAGCATCAAACTCGCTCCCTGGACGATTCCCACCGAGTTGACTCAGTCGTCGAACCTTGCCAAACTTGACCTCGGCAACACTAACCTCGTCGGTTCTCTGCCCGACATGTTCGGTTCGCTCGTAAGTTTGCAGGAACTTCGTCTCTCTTACAACAACCTCACTGGTGGTTTGCCTAAGTCATTTGCAGGATCTGGGATTCAGAATCTGTGGCTCAACAATCAGGAAGATGGGTTCGGGTTTTCGGGTTCCATCGAGGTGCTTTCTTCCATGCAGCATTTGTCTCAGGTGTGGCTTCAGAAGAACCAGTTCACGGGTCCCATTCCTGATTTGTCAAATTGTACTGGTTTGTTTGATCTTCAGCTTAGGGATAACCAGTTAACCGGTGTGGTTCCTCCTTCTTTGACGTCTCTGAGTAGCTTGCAGAACGTTTCTTTGGACAACAACTTGCTTCAGGGTCCTGTTCCTTCCTTTGGGAAAGGTGTGCAGGTCACTCTCAAAGGGATCAATAGCTTCTGTCAGAGCAATGCTGGGCCTTGCGATTCGCGGGTTACTACTTTGCTTGACATTGCTGCGGATTTTGGGTATCCCATTCAGTTGGCGCGTTCATGGGGAGGGAATGATCCTTGTCAAGATTGGAGCTTCGTTGTGTGTGCTGCGGGGAAGATTATTACTGTGAATTTGGCGAAACAGAATTTGACGGGAACTATATCACCTGCATTTGCCAATTTAACTGATTTGAGGAACTTGTATCTTGATCATAATAATTTGGTTGGTTCTATACCAGGGAGCTTGACAAGTTTGCCTCAGCTTGAGGTTTTTGACGTGTCTGATAACAACCTTTCTGGAGAGGTTCCCAAGTTCTCTACCAAGGTGAAGTTCAATGCTTCAGGTAATGGTCTGCTTGGGCATTCTGGAGGTGGTGGCGGCGGCAGTGGAACTACTCCGTCCACGGGTCCTGGTGGTGAACCGAGTGGAAATACAAATGGAAATTCAAGTGGTTCTTCGCTATCCCCTGCTTGGATTGCAGGTATAGCCATTATTGCTGTGTTTTTTGTTGCAGTGGTGCTGTTTGTCTTTTGCAAGTGTTATGCCAAAAACCGGCATGGGAAATTTGGAAGGGTTAATAATCCTGAAAATGGGAAAGGAGAAGTTAAAATTGATATGATGAGCGTTGCCAATTCCAATGGATATGGTGGTATTCCCAGCGAGTTGCAAAGCCAGGGCAGTGAGCGTAGTGACCTGCATGTTTTTGAGGGTGGAAATGCTACAATTTCGATCCAAGTACTTCGGCAAGTGACAAATAATTTCAGTGAAGATAACATTTTGGGTAGGGGAGGATTTGGAGTTGTTTATAAAGGGGAATTGCATGATGGAACTAAAATTGCTGTGAAGAGGATGGAATCTGTTGCAATGGGAAGTAAGGGAATGAATGAGTTCCAAGCAGAGATTGCAGTTCTAAGTAAAGTTAGGCATAGGCATTTGGTGGCTCTTTTAGGATATTGCATTAACGGCAACGAAAGGCTTTTGGTGTACGAGCATATGCCGCAAGGAACATTAACACAACATCTGTTTGATTGGCGTGAAAATGGATGTGCTTCTTTGACTTGGAAACAAAGGGTAGCAATAGCTTTGGATGTAGCACGGGGAGTAGAATATTTGCACAGCTTAGCTCAGCAAAGCTTCATTCACAGGGACTTAAAACCCTCAAACATATTATTGGGTGATGACATGAGAGCGAAGGTTGCAGATTTTGGGTTGGTTAAGAATGCACCAGATGGGAAGTACTCTGTCGAGACACGACTGGCTGGAACATTTGGATATCTGGCACCTGAATATGCAGCTACTGGAAGAGTGACAACCAAAGTTGATGTGTACGCATTTGGAGTAGTTCTGATGGAACTGATTACCGGTAGGAGGGCATTGGACGACACTGTGCCTGATGAAAGGTCTCACTTGGTTTCATGGTTCCGTAGGGTACTGATTAACAAGGAGAACATCCCAAAGGCAATTGATCAAACTCTAAACCCCGATGAGGAAACCATGGAGAGCATATATAAAGTGGCTGAGCTTGCAGGCCATTGCACTGCTCGTGAACCTTACCAAAGGCCAGATATGGGGCATGCCGTGAATGTCTTAGTTCCTATGGTAGAGCAATGGAAACCTACTAGCCATGAAGAAGAAGAAGCTTATGGCATTGACCTTCACATGAGTCTTCCTCAAGCTCTGCGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTAATGACATGTCCTTCTCACAGACCCAATCAAGCATTCCAGCAAAACCTTCAGGATTTGCAGATTCCTTTGATTCAATGGACTGCCGATAA 2790 0.4703 MAHPKLKPKTLLSLSNLLLCFSLLSPAIADDGAFMSKLAKALSPTPSGWSGTAFCDWTGVKCDTNRVTAINIASKSLTGTLPSDLNSLSQLSTLSLQNNALAGALPSFANLTMLQTVFLDGNNFTSVPAGCFQGLTSLQILSMTDSIKLAPWTIPTELTQSSNLAKLDLGNTNLVGSLPDMFGSLVSLQELRLSYNNLTGGLPKSFAGSGIQNLWLNNQEDGFGFSGSIEVLSSMQHLSQVWLQKNQFTGPIPDLSNCTGLFDLQLRDNQLTGVVPPSLTSLSSLQNVSLDNNLLQGPVPSFGKGVQVTLKGINSFCQSNAGPCDSRVTTLLDIAADFGYPIQLARSWGGNDPCQDWSFVVCAAGKIITVNLAKQNLTGTISPAFANLTDLRNLYLDHNNLVGSIPGSLTSLPQLEVFDVSDNNLSGEVPKFSTKVKFNASGNGLLGHSGGGGGGSGTTPSTGPGGEPSGNTNGNSSGSSLSPAWIAGIAIIAVFFVAVVLFVFCKCYAKNRHGKFGRVNNPENGKGEVKIDMMSVANSNGYGGIPSELQSQGSERSDLHVFEGGNATISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGSKGMNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEHMPQGTLTQHLFDWRENGCASLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPMVEQWKPTSHEEEEAYGIDLHMSLPQALRRWQANEGTSTMFNDMSFSQTQSSIPAKPSGFADSFDSMDCR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2339 929 SUPERFAMILY L domain-like 42 433 - -
Apr10g2339 929 ProSiteProfiles Protein kinase domain profile. 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2339 929 Gene3D Ribonuclease Inhibitor 32 324 IPR032675 -
Apr10g2339 929 Gene3D Phosphorylase Kinase; domain 1 545 658 - -
Apr10g2339 929 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 17 929 - -
Apr10g2339 929 MobiDBLite consensus disorder prediction 447 477 - -
Apr10g2339 929 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
Apr10g2339 929 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Apr10g2339 929 CDD STKc_IRAK 587 857 - -
Apr10g2339 929 SMART serkin_6 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2339 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Apr10g2339 929 Gene3D Ribonuclease Inhibitor 325 449 IPR032675 -
Apr10g2339 929 MobiDBLite consensus disorder prediction 454 477 - -
Apr10g2339 929 Pfam Leucine rich repeat N-terminal domain 32 63 IPR013210 -
Apr10g2339 929 Pfam Leucine rich repeat N-terminal domain 328 362 IPR013210 -
Apr10g2339 929 SUPERFAMILY Protein kinase-like (PK-like) 559 857 IPR011009 -
Apr10g2339 929 Pfam Protein tyrosine and serine/threonine kinase 584 855 IPR001245 GO:0004672|GO:0006468
Apr10g2339 929 Gene3D Transferase(Phosphotransferase) domain 1 659 881 - -
Apr10g2339 929 PANTHER OSJNBA0070M12.3 PROTEIN 17 929 - -
Apr10g2339 929 Pfam Leucine rich repeat 370 425 IPR001611 GO:0005515
Apr10g2339 929 MobiDBLite consensus disorder prediction 907 929 - -
Apr10g2339 929 SMART LRR_typ_2 88 110 IPR003591 -
Apr10g2339 929 SMART LRR_typ_2 185 208 IPR003591 -
Apr10g2339 929 SMART LRR_typ_2 388 412 IPR003591 -
Apr10g2339 929 SMART LRR_typ_2 111 134 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2339 Apr-Chr10 35274863 35280207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2339 67 857 Receptor kinase-like Gene Family AT5G07280 32.191 7.17e-97 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Apr10g2339 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2339 - - gmx:100781851 1500.72