Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2321 ATGGCAACGCGCTCGATTCATCGGACGGTGGAGAAAGAGGTAGTGGAAATTTCGAAGAAAAATGGGAGAAACCTTAAAGGGGATCATGCAATGGAGAGAAAGATGGGGTTTTCACAATCACAACATTGCCACGTGTCGAAAGATGAAGTGGAAGGCGCCAATCATGATGCTAACGCCAACAGTTCTTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAATTGTCAACTCCATATGCTGTAGAAAAAGGAGGGTGGGTGTCTGCATTCATGCTTATAGGACTTGGAGTGATGTGTGCTTATTGTTCTCATATACTTGGAAAATGCCTTAAAAAGAATCCCAAGTTAAGAAGTTTTGTGGATATTGGGAAGCATGCATTTGGAGCAAAAGGAAGATTAATAGCTTCAACATTCTTCTACATGGAAATTTTCATGTCCCTTGTTTCCTACACCATCTCATTGCATGACAATTTGATCAAAGTCTTTTTGGGGACTAATTTGAAGTTGCACTTGGCTAAATTTTCTTCATCACAGCTCCTAACAGTAGTGGCAGTCTTGATTACCCTGCCTAGTTTGTGGATCAGAGATCTATCTTCCATATCTTTCCTTTCCACTGTTGGTATTCTCATGTCTCTTCTTATTTTCATGTGTGTAGCAGCCACTGCAATTTTTGGAGGTGTCAAAGCTAATCATACCATACCTGTCCTTCAGCTCCATAATTTTCCATCAATTTCTGGCCTCTATATCTTTGGCTATGGAGGACATATTGTTTTCCCTGATTTATATAAAGCCATGAAAGACCCCTCAAAATTTACCAAGGTCTCTATTGTGAGCTTCACAGTGGTTACAACAATTTATACGACATTGGGGTTCATGGGTGCAAAAATGTTTGGCAATGATATAAAGTCTCAGATCACTCTTAGCATGCCACCAGAGCAAATTGTGACAAAGATTGCTTTGTGGGCAACCGTGCTTACACCCATGACCAAATATGCACTTGAATTTACACCATTGGCAATTCAACTAGAGCATGCACTTCCAAGTGCCATGAGTGGAAAGACAAAAATGATAATTAGGAGCTGCGTGGGTTCACTTTTGCTTTTGGTCATTTTAACACTTGCTCTTTCAATTCCTTACTTCGAGCATGTGCTTAGCCTCACTGGTTCCCTTGTTAGTGCGGCCATTTGTTTAATTTTTCCATGTGCTTTCTACATGAAGATATGTTGGGGTCAAATACCAAAGCCTCTCTTAGTCCTAAACATGTCTCTCATCACATTCGGGTTTATTCTTGGGGTGATGGGTACCATTTCCTCCTCAAAGTTACTATTCAAAAATTACCAATCACATAACTCAACTTGA 1374 0.4054 MATRSIHRTVEKEVVEISKKNGRNLKGDHAMERKMGFSQSQHCHVSKDEVEGANHDANANSSFTHAVINMVGMLIGLGQLSTPYAVEKGGWVSAFMLIGLGVMCAYCSHILGKCLKKNPKLRSFVDIGKHAFGAKGRLIASTFFYMEIFMSLVSYTISLHDNLIKVFLGTNLKLHLAKFSSSQLLTVVAVLITLPSLWIRDLSSISFLSTVGILMSLLIFMCVAATAIFGGVKANHTIPVLQLHNFPSISGLYIFGYGGHIVFPDLYKAMKDPSKFTKVSIVSFTVVTTIYTTLGFMGAKMFGNDIKSQITLSMPPEQIVTKIALWATVLTPMTKYALEFTPLAIQLEHALPSAMSGKTKMIIRSCVGSLLLLVILTLALSIPYFEHVLSLTGSLVSAAICLIFPCAFYMKICWGQIPKPLLVLNMSLITFGFILGVMGTISSSKLLFKNYQSHNST* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2321 457 PANTHER OS05G0424000 PROTEIN-RELATED 44 450 - -
Apr10g2321 457 Pfam Transmembrane amino acid transporter protein 60 441 IPR013057 -
Apr10g2321 457 PANTHER AMINO ACID TRANSPORTER AVT1H 44 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2321 Apr-Chr10 35172302 35185931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2321 42 450 Amino Acid or Auxin Permease AAAP Family AT5G16740 61.125 1.24e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2321 - - gmx:100790897 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2321 10 35172302 35185931 Apr10g2321 10 35172302 35185931 ECH