Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g2301 | ATGGTTATGGCGGAAGAAGAAGAGAAGGCGGTATCGAGCGAACCCGAATTCCCGAAGAGTCGGGTGAAGAAGATTATGACTCTGGACGAAGAGGTGAAGAGGGTGAGCTCAGAAGCGCTGTTCCTGGTGTCGCGCTCCACGGAATTATTCCTCCAATATCTTGCTGAAAATTCAGCGCAAGTTGCCATTGAGAAGAAACGCAAGACGGTGAAGCTTGAACACATAAGAATGGCCGTGAAGAGGCACCGACCAACTCGGGATTTTCTCCTCGATTCGCTTCCGTTGCCTTCTCAGCCCACTAAACCCGATGGGCCCACTCCGGCTGGGGATCGGCCCAAATCCAATACTGCTCCGCCTGGTACTCGTCGTATTGATCACTTCTTCCGAAAGCCAGAATCTGAAAACCAAACCCAAGCCCCAATAGATGCCCAAGCCCCAATAGATGAATCTTAG | 453 | 0.5143 | MVMAEEEEKAVSSEPEFPKSRVKKIMTLDEEVKRVSSEALFLVSRSTELFLQYLAENSAQVAIEKKRKTVKLEHIRMAVKRHRPTRDFLLDSLPLPSQPTKPDGPTPAGDRPKSNTAPPGTRRIDHFFRKPESENQTQAPIDAQAPIDES* | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g2301 | 150 | MobiDBLite | consensus disorder prediction | 86 | 150 | - | - | |
Apr10g2301 | 150 | Gene3D | Histone, subunit A | 1 | 94 | IPR009072 | GO:0046982 | |
Apr10g2301 | 150 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 16 | 79 | IPR003958 | - | |
Apr10g2301 | 150 | PANTHER | NUCLEAR FACTOR Y, SUBUNIT C13 | 5 | 132 | - | - | |
Apr10g2301 | 150 | SUPERFAMILY | Histone-fold | 14 | 81 | IPR009072 | GO:0046982 | |
Apr10g2301 | 150 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 5 | 132 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g2301 | 5 | 137 | CCAAT-HAP5 Transcription Factor Family | AT5G43250 | 55.970 | 3.78e-44 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Apr10g2301 | CBFD_NFYB_HMF | 9.7e-19 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g2301 | - | - | ccaj:109814845 | 211.46 |