Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2286 ATGGCGCCTGGTAAACATGGAGGTTATCGTGACAACGAGTTTATGGACTGTGAGTCAAATTTTGATGTTTCAAGGCGGGTTTATTATAATGATTCTAAAGAAGAGTATGATAGGATTAGGATTAAGAACGGTAGCCGTGACTCTGCAAGGGGTGGAAGCAGGGATGCAAGAGACAAGATTAGACTGAGACAGAAAGATACTAGGGAGAGGAAAGCTTCAAATGGCAGTCGTTGGTCAACTTCGAGTAGGAGTGACTCAGGCAGCAGTGGCAGTCGTAGTGGTGGGGTTGGTCCCAGACGATGTGGATTTTCTGTTAAGACTATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGATGGTATTGAATCAGAATCACGCGGAAAATACACTGAGGTTGCTACAGGTGAAGAAAATGGGACACGATTTCTGGTAGACAGGAAAAGAAAATTTTCACCAATAGTATGGGATCAGGACGACAGAGAAGTGAATAATTTATCCAAACTTGGGGTTGCCACAGCAGCAAGTGCTCTTCCTCAGCCTCCTTCATTTCCAAGAATCCATCAGATACCTTTTGGTCCTTACAGTGGAGTTGAAACCCATCCTGTCAAAAATACAGAAGCTGAGAATCTTGAGTTGCCAACTGCAACTAATTTTCCTTTGCTATCCAAGTCAGTTCAGGATACCGAGTCTGAGTCTCCTGTAGGTTTGCATTCATTGTTGCCAGGGCAGAAATGGGGTCATGAGCTGGAAGCTGAGCAACCTGAAGGTGAAGATTATATTCCAACTCACAATATATCATCTTCAAGATGGGCAGCTGGAGATAATTCTCCTGGTGATGAAGGTGAAATCAATGATGACAAGGAAATCCATGAGAGGAGGAGGAAGATATCTCCTGAGCTGGTTAAGAGAGTAAGAAATAAGATCTCGAGACAGGAGGAATCTAAAATAGATGGTTTTGAAGGAGCTAGAGCCAAATCATCTGAATCTGAAGAAAGAGGTAGCCATGGGAGATCGTCCAGTGGAGACGATCATTCTGGTATTGAGTCAGAGAAGGATGATTATATGGAGATTGATGGTCAAGGTCACAAAAGTGAAACTAGTGGTAGTCATTTGGATACAGATTCTGAAGATGATAGCAGGGAAACCCCTGAACCTCCGGCTGCACCACAAAGAGTTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGACGAGTTTGAGAGATTGAACAAGATAAATGAAGGAACATATGGTATTGTGTTTAGGGCCAAAGATAAGAAGACTGGAGAAATTGTGGCATTGAAAAAGGTGAAAATGGAGAAGGAAAAAGAAGGTTTTCCGATGACTTCTCTTAGGGAAATAAACATTCTTCTGTCCTTTCATCACCGATCTATAGTAGATGTTAAGGAAGTAGTGGTAGGGAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTCAAAGGACTAATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTGCAGCTTTTAGAAGGTATGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTACTTCTGAACAATAGGGGTGAATTAAAAATTTGTGATTTTGGATTGGCTCGTCAGTATGGGAGTCCATTGAAACCATATACGCACCTGGTCGTTACTCTTTGGTACAGGGCTCCAGAACTTCTTCTGGGAAAAAAACAGTATTCGACAGCTATTGACATGTGGTCTTTGGGTTGTATAATGGCTGAACTATTATCCAAGGAACCGCTGTTTAATGGGAAGACTGAATTTGATCAACTTGACAAGATTTTCAGAATTCTTGGCACACCAAATGAAGCAATTTGGCCTGGGTTTTCAGAATTACCTCGAGCAAAGGTCAAGTTTGTCAAGCATCAGTATAATCTCCTGCGGAAAAAATTTCCTGCAACATCATTCACTGGATCTCCAGTGCTTTCCGATTCTGGATTTGATTTGTTGAACAAACTTCTTACCTATGACCCTGAAAAGCGGATCACAGCTGAAGAAGCTTTAAACCATGAGTGGTTTCGTGAAGTTCCCCTTCCGAAGTCTAAAGAGTTCATGCCTACATTCCCTGCTCAACATGCTCAAGACAGGCGCACACGAAGAATATTGAAGAGCCCAGATCCCTTAGCGGAGCAGTACCAGAAGGAATTGCAGCAGGGTGAATCAGGGACTGGTGGTATTTTTGGTTAA 2268 0.4255 MAPGKHGGYRDNEFMDCESNFDVSRRVYYNDSKEEYDRIRIKNGSRDSARGGSRDARDKIRLRQKDTRERKASNGSRWSTSSRSDSGSSGSRSGGVGPRRCGFSVKTMDREPGELSSESGSDDGIESESRGKYTEVATGEENGTRFLVDRKRKFSPIVWDQDDREVNNLSKLGVATAASALPQPPSFPRIHQIPFGPYSGVETHPVKNTEAENLELPTATNFPLLSKSVQDTESESPVGLHSLLPGQKWGHELEAEQPEGEDYIPTHNISSSRWAAGDNSPGDEGEINDDKEIHERRRKISPELVKRVRNKISRQEESKIDGFEGARAKSSESEERGSHGRSSSGDDHSGIESEKDDYMEIDGQGHKSETSGSHLDTDSEDDSRETPEPPAAPQRVVNMLQGCRSVDEFERLNKINEGTYGIVFRAKDKKTGEIVALKKVKMEKEKEGFPMTSLREINILLSFHHRSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGMKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGKKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNEAIWPGFSELPRAKVKFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQHAQDRRTRRILKSPDPLAEQYQKELQQGESGTGGIFG* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2286 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Apr10g2286 755 PANTHER CELL DIVISION PROTEIN KINASE 135 755 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 74 93 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 104 135 - -
Apr10g2286 755 ProSiteProfiles Protein kinase domain profile. 409 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2286 755 Pfam Protein kinase domain 409 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2286 755 Gene3D Transferase(Phosphotransferase) domain 1 492 731 - -
Apr10g2286 755 PANTHER - 135 755 - -
Apr10g2286 755 CDD STKc_CDC2L1 403 700 IPR045267 GO:0004674|GO:0005524|GO:0006468
Apr10g2286 755 SUPERFAMILY Protein kinase-like (PK-like) 401 706 IPR011009 -
Apr10g2286 755 Gene3D Phosphorylase Kinase; domain 1 394 491 - -
Apr10g2286 755 SMART serkin_6 409 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2286 755 MobiDBLite consensus disorder prediction 316 395 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 32 138 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 316 388 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 32 73 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 226 298 - -
Apr10g2286 755 MobiDBLite consensus disorder prediction 284 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2286 Apr-Chr10 34970908 34977286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2286 400 727 Core Cell Cycle Gene Families AT5G10270 44.380 1.63e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Apr10g2286 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2286 K08818 - gmx:100793729 1142.87