Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2280 ATGGAAGAGGAAATCAAGTCAGAATTCAAAAGAAGCGGGTTCGACATCGAAGACGAAGAAGAAATACTGAACAAATGTATTCCTTTTTGCATCAACTACAGTCTCAGTCCTTCCGATCTCGTCTCAAGCTGGGAGGTTTATTACCTGAATAGACAGCTGAACGAACCATTGGTACAAAATGCTGAGATCGATGGCTTTCTGCTGCATCTGCAGAATCAGAAGAAAGAGGATGTTATAAAGGAACAGGAAGAAGCTGGTTTGCATGTTTACTCTATCAGAGATGTAGAAATGATCTTAAATAAAGATGATGATGATACGCCTGGAACTCCAACAGATCATCATCAAGATCTTTTTTCTCCGGCGCATGACACACCATCATTAATGTATGAGAATGTTTTATCTTCTGGGAAACTATCAAAATCAAAATTAGTAACACCCTTTTCAAAGCGAACAGATAGGTTTGCGGTGAAATTTAGCATCAACACTATCCCTGATGTAGAGAATGAAAAACACGAACCTAATCATGAGAGTGATGAAGATGATATTGTTAGAAGAGTCCTACCTCGGAAAAGGTGTTCATTGGTCATCCATGGATCAGGACCCAAACCAGGTTGCAGATTCATGTATGATACGACTGAGGATAGGCTTAATGCAATAGAAAACCGAATTAAGAAACATACAAGGGCGTTTGTTGCTTCTGGGCTCTATGAACCAACAGACCCCACGACTGCTTCACAGAGAAGCATTTTTGCTGTTGGGATGATTTGTTGCGATGGAGAAGGCCGTATAAATGAGAAATCTGTCATGCTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTTCGCCTTGACTTACAAAATTTAAGCCACTATTCAGTTTTTCCTGGTCAGGTAGTTGGTATTGGAGGGCATAATCCTAGTGGGCATTGCTTCGTTGTGTCTAAATTGGTGGATTCTATACCTTTTGCTATTGCCGATGAGGATTTGAATCCTGCGAAGAAGCAAGCTATTGGTAAGGAGAATCAGTCAACTGATCTGTTTTGTAAACAGAGAGAGTTGTCAATGATTATTGCAGCTGGCCCCTTTACTACAACAGACAATTTATTGTTTGAGCCTCTTGTAGAACTGCTGACATATGCAAAACGAAGACCACCACAGTTGCTTGTATTGCTGGGACCATTTGTTGATGCTGACCACCCAGACATTAAAAATGGAACCGTGGACAGGAGTTTTGATGAAATATTTCATTTTGAAATCATGAAGAAGTTGGAAGATTATGTAGAATGTATGGGTTCCGCACCACGTGTTCTTCTTGTACCATCTATACGGGATGCTAACCACGACTTTGTTTTTCCTCAGCCTGCATTGGATATCAATCTTCCCGATCTGAAATCTCAGATAGTCAGTCTCACTAATCCTGGAATCTTCGAGGCAAACGAGGTTAAAGTTGGTTGCTGCACCGTGGATATTCTCAAGCACGTTAGTGGGGAGGAGATATCACGAACTGCCTCAGATGGAAAACCCATTGATCGCATGAGTAGACTTGCAAACCATATTCTTAATCAACGAAGCTTCTATCCACTTTACCCGCCGGCTGAAAGTATTCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTCTCATTGGTTCCAGATGTACTTATCCTCCCTTCAGATATCAAATATTTTGTCAAGGTTCTTAATAGTGAAGGGGAAGGGATAAACCAATCGAAATGCATTGCTATCAATCCGGGAAGATTAGCCAAGGGAGAAGGAGGAGGAACTTTTGCCGAGCTTGAATATTGTGGGGGTTCCGACAAAATTAACGCTTCTATTGTTGGCATATGA 1854 0.4159 MEEEIKSEFKRSGFDIEDEEEILNKCIPFCINYSLSPSDLVSSWEVYYLNRQLNEPLVQNAEIDGFLLHLQNQKKEDVIKEQEEAGLHVYSIRDVEMILNKDDDDTPGTPTDHHQDLFSPAHDTPSLMYENVLSSGKLSKSKLVTPFSKRTDRFAVKFSINTIPDVENEKHEPNHESDEDDIVRRVLPRKRCSLVIHGSGPKPGCRFMYDTTEDRLNAIENRIKKHTRAFVASGLYEPTDPTTASQRSIFAVGMICCDGEGRINEKSVMLQSSIEHSGGECVRLDLQNLSHYSVFPGQVVGIGGHNPSGHCFVVSKLVDSIPFAIADEDLNPAKKQAIGKENQSTDLFCKQRELSMIIAAGPFTTTDNLLFEPLVELLTYAKRRPPQLLVLLGPFVDADHPDIKNGTVDRSFDEIFHFEIMKKLEDYVECMGSAPRVLLVPSIRDANHDFVFPQPALDINLPDLKSQIVSLTNPGIFEANEVKVGCCTVDILKHVSGEEISRTASDGKPIDRMSRLANHILNQRSFYPLYPPAESIPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLNSEGEGINQSKCIAINPGRLAKGEGGGTFAELEYCGGSDKINASIVGI* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2280 617 Gene3D - 336 506 - -
Apr10g2280 617 Gene3D - 507 612 - -
Apr10g2280 617 Coils Coil 209 229 - -
Apr10g2280 617 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 615 IPR016722 -
Apr10g2280 617 PIRSF DNA_pol_alpha_2 1 608 IPR016722 -
Apr10g2280 617 Pfam DNA polymerase alpha/epsilon subunit B 357 567 IPR007185 GO:0003677|GO:0006260
Apr10g2280 617 Gene3D - 1 66 IPR043034 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2280 2 617 Core DNA Replication Machinery Family AT1G67630 58.682 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2280 K02321 - gmx:100795306 1011.13