Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2274 ATGTATTTATCGGAGAAACCTCGTCCCATCGATTTCTACAAGGAAGAAGGGGCACGAGACATGATAATCGAGGTGGTGTCCAGCGGCGAGCTTCCGCCGCCGCCGCCGCACCACCAGCAGCCGCCGATGATCCTCGGCGAGAGCAGCGGCGAGGACCCGGAGGTGGAGATCAAGGCGCCGAAGAAACGCGCCGAGACTTGGGTGCAAGACGAGACGCGAAGCCTCATTGGGCTTCGGCGTGAGATGGATTCGCTCTTCAACACTTCTAAGTCGAACAAGCACTTGTGGGAACAGATTTCGGCGAAGATGAGGGAAAAGGGTTTCGATCGTTCTCCAACGATGTGCACTGATAAGTGGAGGAACTTGTTGAAGGAGTTTAAGAAGGCGAAGCAACAAGATAGAGGAGGGAGTGGTTCTGCTAAGATGTCTTATTACAAAGAGATTGATGAGATCCTCAGAGAGAGGAGCAAGAGTGTGCAGTACAAGAGCCCTACTCCTCCTCCTAAAGTTGATTCTTTTATGCAGTTTGCTGATAAAGGTATCGATGATACCAGCATCTCTTTTGGGCCAGTTGAAGCTAGTGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCGAGTGGAGTCCCTCCTTGGAATTGGAGAGAGACTCCTGGGAATGGTGGGGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTCAAATGGGGTGATTATACAAGACGAATAGGTATTGATGGCACTCCAGAAGCCATCAAGGAAGCAATTAGAGCTGCTTTTAGATTGAGAACTAAACGTGCATTTTGGTTGGAGGATGAAGACCAGATTATCAGAAGTATTGACCGTGACATGCCTATAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGACCATATCCCTGTGCATACTGAAGAGAAGATATTTTACACCGAAGATGATTACCGGGATTTTCTGGCACGCCGAGGTTGGACATGTCTAAGAGAATTTGATGGCTACAGAAATATTGACAATATGGATGATCTCCGTCATGGTGCCATATACCGTGGTGTGAGCTGA 1137 0.4785 MYLSEKPRPIDFYKEEGARDMIIEVVSSGELPPPPPHHQQPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKQQDRGGSGSAKMSYYKEIDEILRERSKSVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEASGRPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEDQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLARRGWTCLREFDGYRNIDNMDDLRHGAIYRGVS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2274 378 Pfam Myb/SANT-like DNA-binding domain 66 151 IPR044822 -
Apr10g2274 378 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Apr10g2274 378 PANTHER - 5 377 - -
Apr10g2274 378 CDD GT1 65 130 - -
Apr10g2274 378 SMART sant 63 125 IPR001005 -
Apr10g2274 378 Gene3D - 67 129 - -
Apr10g2274 378 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 377 - -
Apr10g2274 378 MobiDBLite consensus disorder prediction 27 54 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2274 21 377 Trihelix Transcription Factor Family AT3G25990 72.329 0.0 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr10g2274 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2274 - - ccaj:109807736 734.561