Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2265 ATGGGTTTTTTTTGTTCTATTTTTCTGGTGGTTGTTTCTCTTATAACATCATGTGTGGTTAGCCAACTTGAAGAATTTATCAGTATTGATTGTGGAGGGACTAGTAACTACACTGATAAAAGCACAGGCCTTGCATGGATTTCAGACTCTGGGATCATGCAATATGGCAAGCCAGTGGAAGTTCAAAATCCTAATGGAAACAAGGTTCAGTATCAGAGACGAAGAGACTTTCCTATAGATAATAGGAAGTACTGTTATACACTTAGCACTGAGGAGAGAAGAAGGTATCTGGTAAGAGCAACGTTTCAATATGGAAGCTTGGATGATGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCTACTGTGTCAATATATGATGCTTCAAGAATATATGTGAAGGAAATGATCTTCAGGGCACCCTCAAACTCTTTTGATGTTTGCCTGTGCTGTGCTACAACTGGTTCTCCCTTCATATCTACCCTTGAGTTGAGGCCCTTGAATCTTTCTATGTATGCCACGGATTTTGAGAGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATCAACTTTGGTGCTCCAAGTGAGGATGCTGTGAGGTATCCTGATGATCCATATGATAGAATTTGGGAGTCTGATCTTATAAAGAGACAAAATTATCTTGTTGGGGTGGCTCCAGGCACAGAAAGAATCAACACAACAAAGAACATAGAAATAGAGACAAGAGAATATCCACCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACAAAAGGAGTACTTAGCTATAGACTAAACCTAGAAGACTTCCCTAGCAATGCTAGAGCTTATGCATATTTTGCTGAGATTGAAGATCTGGACAAGAATGAGACTAGAAAATTCAAGTTGGAGCAACCTTACATAGCTGACTATAGCAATGCAGTGGTGAACATTGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAACCAAGTTACATGAATGTGAGTCTGGAATTTGTTCTTTCATTCTCCTTCGTTAAGACCCGGGATTCTACAAGAGGACCTCTTCTAAATGCAATGGAAATAAGCAAATATGTACAAATTGCTTCAAAGACCGACAAGCAAGATTCAAATTTTGTAAATGCACTTCGCTTCTTGTCTCCTGACAGTGTCCTGAAGAATGAAGGTGACCCCTGTGTTCCTACTCCCTGGGAGTGGATAAACTGTAGTACCACTACACCTCCAAGAATTACAAAGATAAACCTGTCAAGAAGGAATCTGAAGGGTGAAATACCACAGGAACTCAACAACATGGAAGCATTGACAGAACTGTGGTTAGATGGAAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTGTCAATTTAAAGATTGTGCATCTAGAGAACAACAAATTGACTGGTCCACTACCATCTTACTTGGGTAGTTTACCAAGTTTACAAGCACTGTTCATACAGAATAACTCATTTACTGGGGAAATACCTGCAGGATTATTGTCTGGAAAAATAATTTTCAAATTTGATGATAATCTTGAACTGCATAGAGGGAACAAGAAACATTTTCATTTGATGCTAGGAATTTCTGTTGGAGTACTAGTGATTCTATTAATATTGTTCTTAACAAGTTTGGTGCTATTGCTTAATCTACGGAGAAAGACATCTCAACAAAAACGTGATGAACAAGGTATTTCTGGACGCAGCAGCACTAAACCTTTAACTGGATACTCATTTGGTCGAGGTGGGAATTTAATGGATGAAGGTACTGCTTACTACATTACACTCTCAGAGTTGAAGGAAGCTACTAATAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTTCTATGGGAAAATGAGAGATGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCCATGGGAACCAACAATTTGTAAATGAGGTAGCCCTTTTGTCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATACCAACATATTCTGGTTTATGAGTACATGCACAACGGCACTTTAAGGGAATACATTCATGAGTGTTCAAGTCAGAAGCAATTAGATTGGTTAGCTCGGCTTCGTATTGCAGAAGATGCAGCTAAGGGTCTTGAATATTTACACACAGGATGCAATCCTAGTATCATTCACCGGGATGTGAAAACAAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCGGATTTTGGACTCTCAAGACTAGCTGAAGAAGATTTAACTCACATATCAAGTGTTGCAAGGGGAACTGTGGGTTACCTAGATCCTGAATACTATGCAAATCAACAACTGACTGAAAAGAGTGATGTGTACAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAAAAAGCCTGTATCATCAGAAGATTATGGTCCTGAGATGAATATCGTTCACTGGGCAAGATCCTTAATTCGTAAAGGAGATGTGATAAGCATAATGGATCCTTCCCTTGTTGGGAATGTGAAAACTGAGTCAGTTTGGAGGGTTGCAGAAATTGCCATGCAATGTGTAGAGCAACATGGTGCCTCCAGGCCAAGGATGCAAGAAGTCATTTTGGCCATTCAAGATGCTTCAAAGATTGAAAAAGGGTCAGAAAGTCAACTAAAGTTTTCTTCATCATCTTCTAGTAGTTCTTATCAGGATTCTCTCAAAGTACTGGAGGCTGATATTCAACACGCCAATGCTTTGGCTGCTGCAATTCCCAGAACCAAGGGTGGGACTCTTGTTCAAATGAAATTGGTTTACAATCAACTTGCTCCTCTCTTCCTACTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTGCATCGGTATCTCAATCTCTTCCACGTACTTATATACAAGGTACACAATGATGGTAGATCAAACATGTCCACTCACGGAAGGAAGGCTACCATTGGGGACTTTTATGCTGTTATATTGCCATCTCTTCAGCGGCTTCATGGTAGTTTTGAGAAGTTGGAGGATTGTGAAGAAGGGCACTCAAGCATGGAAGGTTCAAGTTATGGCAAGAAGGTGATTGAAGGTGGGAAACTAACCAATCTTGATTTCCAAAGAGAAGATGAATGTGGGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTAATTGCTGTCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACAGAAAATCTGAATCTTGTCCTTTTTGCCGCGGTAACTTAAGAAGAGTTAATTCGGAGGATCTATGGGTACTAACTTGTAATGATGATGTTGTTGATGCTGAAACAGTTTCTAAGGAGGACTTGTTGCGTTTTTACCTCTATATCAACAAGCTACCTAAAGATCACCCAGATGCACTTTTCCTAATGTATTATGAATATCTGATTTAA 3438 0.397 MGFFCSIFLVVVSLITSCVVSQLEEFISIDCGGTSNYTDKSTGLAWISDSGIMQYGKPVEVQNPNGNKVQYQRRRDFPIDNRKYCYTLSTEERRRYLVRATFQYGSLDDGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIFRAPSNSFDVCLCCATTGSPFISTLELRPLNLSMYATDFESSFFLKVAARINFGAPSEDAVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKNIEIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPSNARAYAYFAEIEDLDKNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVKTRDSTRGPLLNAMEISKYVQIASKTDKQDSNFVNALRFLSPDSVLKNEGDPCVPTPWEWINCSTTTPPRITKINLSRRNLKGEIPQELNNMEALTELWLDGNLLTGQLPDMSNLVNLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFTGEIPAGLLSGKIIFKFDDNLELHRGNKKHFHLMLGISVGVLVILLILFLTSLVLLLNLRRKTSQQKRDEQGISGRSSTKPLTGYSFGRGGNLMDEGTAYYITLSELKEATNNFSKKIGKGSFGSVFYGKMRDGKEVAVKTMTDPSSHGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWARSLIRKGDVISIMDPSLVGNVKTESVWRVAEIAMQCVEQHGASRPRMQEVILAIQDASKIEKGSESQLKFSSSSSSSSYQDSLKVLEADIQHANALAAAIPRTKGGTLVQMKLVYNQLAPLFLLFLQWMDCSCAGFLHRYLNLFHVLIYKVHNDGRSNMSTHGRKATIGDFYAVILPSLQRLHGSFEKLEDCEEGHSSMEGSSYGKKVIEGGKLTNLDFQREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNRKSESCPFCRGNLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYINKLPKDHPDALFLMYYEYLI* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2265 1145 MobiDBLite consensus disorder prediction 566 581 - -
Apr10g2265 1145 Pfam Malectin-like domain 29 362 IPR024788 -
Apr10g2265 1145 PANTHER - 17 899 - -
Apr10g2265 1145 ProSiteProfiles Protein kinase domain profile. 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2265 1145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1032 1097 IPR013083 -
Apr10g2265 1145 SUPERFAMILY RING/U-box 1040 1091 - -
Apr10g2265 1145 Gene3D Transferase(Phosphotransferase) domain 1 684 903 - -
Apr10g2265 1145 Gene3D Ribonuclease Inhibitor 370 518 IPR032675 -
Apr10g2265 1145 ProSiteProfiles Zinc finger RING-type profile. 1049 1087 IPR001841 -
Apr10g2265 1145 Gene3D Phosphorylase Kinase; domain 1 588 683 - -
Apr10g2265 1145 SUPERFAMILY Protein kinase-like (PK-like) 593 875 IPR011009 -
Apr10g2265 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Apr10g2265 1145 PANTHER OS07G0107800 PROTEIN-RELATED 17 899 - -
Apr10g2265 1145 Pfam Ring finger domain 1047 1087 IPR001841 -
Apr10g2265 1145 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Apr10g2265 1145 ProSitePatterns Zinc finger RING-type signature. 1064 1073 IPR017907 -
Apr10g2265 1145 SMART serkin_6 608 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2265 1145 SMART ring_2 1049 1086 IPR001841 -
Apr10g2265 1145 MobiDBLite consensus disorder prediction 562 581 - -
Apr10g2265 1145 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Apr10g2265 1145 SUPERFAMILY L domain-like 398 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2265 Apr-Chr10 34844908 34855613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2265 1 892 Receptor kinase-like Gene Family AT1G67720 70.022 0.0 1296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr10g2265 Malectin_like 9e-91 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2265 - - aprc:113850330 2234.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2265 10 34844908 34855613 Apr2g1712 2 22742325 22744260 PCT