LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr10g2257	ATGGCAGCTCTATTACCTTGCGCGCCGAATATAGTTTCTGCTCCGTTAGCGAACCGGACGACCGTGAACCGTTTCCCGCATCGACCTCACTCACACGCTTTCTCCGGTTCGACCAAACACTTTCTTCGCGGTTCGGTTTCTGTTGTCCGGTTTGGACTCAAGTCCGGTTTGTTGCCTGAGCCGGATGAGGCCGAAGGCGTTGTTAGGGAACTGTTTGGGCGAGTGGAGGGTCTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCTTCCGATGCGGCGGCGGTCACTACCACCGCCAAACAGAGCAACGATTGGCTTTCTGGAATTACCAATTACATGGAGACTATTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCGTTAACCAAAAAACAGGTAGAATCTTCCTTGGCTATGAGATCTTTGCAACCTCAAGTAAAGGCTATCCAGCAACAATATGCTGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTAGCCAACATCAATCCTCTAGCAGGATGCTTGCCCACACTCGCAACAATACCAGTGTGGATTGGGCTGTATCGAGCCCTTTCAAACGTGGCAGATGAGGGACTTCTTACTGAAGGCTTTTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAGTGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTTGTCTTACCTGTGTTGTTGGTTGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGGCTAATGATCCCAACATGAAAAGTTCACAAGCCTTAACCAAGTTCCTTCCTTTAATGATTGGTTACTTTTCTCTCTCAGTGCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACCGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGCAGCAAGTCCAAAATGATATCATGACGGATGACCTAACACAGGTTCAGAATTCAATATCTAAAATAAATTCCACAAAAGTGGAAGAAGCCAGACCAAGCGAGAAAAAATTGGAGGGGCCACATCGTGGTGAAAGATTTAAACAAATAATGGAGCAAGAGGCAAAGAGAAGACAACGAAGAGATGAAGAAAAAAGGAAAGCCATGGAAGCAGAAGCTAGAGCAACCAAAGTACATGAGACACATGAGAAAACAGTCGAAGGGGGAAATCAAACTGGAGGTGATTTAGTTGAAAAACCTGAGTCTGTGGCTTCAGATACTGACCCCTTCATATCTGGAGTAGTAAACGGTAATGGGTTAAGTTTGGAAGGAAATCAGAATTCTACATCTACATCTGAGACAGAAAATAATGAAGGTTCTGCTCATTTCAATGATGTTGAGAGAAACAAGGAAAGTTTAGACAAGGAACCAAGAGAAGTATTAACAACTACAGCCACCACGAACAAACAACCTCCTGTAGAAGACTCCGATCGTGTGACGAAGGATTGA	1611	0.4432	MAALLPCAPNIVSAPLANRTTVNRFPHRPHSHAFSGSTKHFLRGSVSVVRFGLKSGLLPEPDEAEGVVRELFGRVEGLLYTIADAAVSSSDAAAVTTTAKQSNDWLSGITNYMETILKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRSLQPQVKAIQQQYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQSGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQANDPNMKSSQALTKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPLQQVQNDIMTDDLTQVQNSISKINSTKVEEARPSEKKLEGPHRGERFKQIMEQEAKRRQRRDEEKRKAMEAEARATKVHETHEKTVEGGNQTGGDLVEKPESVASDTDPFISGVVNGNGLSLEGNQNSTSTSETENNEGSAHFNDVERNKESLDKEPREVLTTTATTNKQPPVEDSDRVTKD*	537

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr10g2257	536	MobiDBLite	consensus disorder prediction	463	493	-	-
	Apr10g2257	536	MobiDBLite	consensus disorder prediction	382	440	-	-
	Apr10g2257	536	PANTHER	OXA1	73	443	IPR001708	GO:0016021\|GO:0032977
	Apr10g2257	536	MobiDBLite	consensus disorder prediction	379	536	-	-
	Apr10g2257	536	MobiDBLite	consensus disorder prediction	513	527	-	-
	Apr10g2257	536	Pfam	60Kd inner membrane protein	133	347	IPR001708	GO:0016021\|GO:0032977
	Apr10g2257	536	PANTHER	BNAA09G28180D PROTEIN	73	443	-	-
	Apr10g2257	536	Coils	Coil	406	426	-	-
	Apr10g2257	536	MobiDBLite	consensus disorder prediction	494	512	-	-
	Apr10g2257	536	TIGRFAM	yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family	133	347	IPR028055	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr10g2257	Apr-Chr10	34801878	34807972	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr10g2257	68	419	Chloroplast and Mitochondria Gene Families	AT2G28800	54.930	1.85e-131	388

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr10g2257	K03217		-	gmx:100802546	828.935

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