Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g2236 | ATGGGTCTCTCAAATTTTCCAAGCGCATCTGAAGGGGTGCTACCAGTGCTTGTGATGAACACAGTTCTCTCAGTGGCTTTGTTAAAGAACATATTTAGATCCTTGCTTCAAGTAGTTGTTGGTAGTGGCAATAATACTCCAAGCACTTCCTCTTACTCTTCAAGTATTGGACAAGAGTCCTATGAAGATGATGAGGGTTCAAGGGAAAGAAGGGTGTCAATAACTCAATACAAGTCATTGTGCCACAACAAGTCCAACATAGGCACAAGTATTGCTATGGCGGAGTGCTGCGTTTGTTTGTGTGGTTTTGAGGCCAATCATGAGGTGAGCCAATTGCCTTGCAAGCATTTCTTCCACAGAGGCTGCTTAGACAAATGGTTTGATAACAAACACACCACATGTCCTTTATGTCGTTCCATCGACTAA | 426 | 0.4296 | MGLSNFPSASEGVLPVLVMNTVLSVALLKNIFRSLLQVVVGSGNNTPSTSSYSSSIGQESYEDDEGSRERRVSITQYKSLCHNKSNIGTSIAMAECCVCLCGFEANHEVSQLPCKHFFHRGCLDKWFDNKHTTCPLCRSID* | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g2236 | 141 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 141 | IPR013083 | - | |
Apr10g2236 | 141 | MobiDBLite | consensus disorder prediction | 44 | 60 | - | - | |
Apr10g2236 | 141 | SUPERFAMILY | RING/U-box | 95 | 139 | - | - | |
Apr10g2236 | 141 | SMART | ring_2 | 96 | 137 | IPR001841 | - | |
Apr10g2236 | 141 | ProSiteProfiles | Zinc finger RING-type profile. | 96 | 138 | IPR001841 | - | |
Apr10g2236 | 141 | SMART | ringv_2 | 95 | 138 | IPR011016 | GO:0008270 | |
Apr10g2236 | 141 | MobiDBLite | consensus disorder prediction | 44 | 69 | - | - | |
Apr10g2236 | 141 | PANTHER | - | 1 | 140 | IPR044249 | - | |
Apr10g2236 | 141 | Pfam | Ring finger domain | 95 | 138 | IPR001841 | - | |
Apr10g2236 | 141 | PANTHER | F21J9.24-RELATED | 1 | 140 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g2236 | Apr-Chr10 | 34666863 | 34667489 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g2236 | 1 | 139 | C3H Transcription Factor Family | AT2G04240 | 36.364 | 2.95e-23 | 87.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g2236 | K16285 | - | gmx:100811790 | 203.371 |