Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2211 ATGGATTTGGTATCTGTTCTTTTGCTAATGTCTAGCATATGCTCTTTTGCGCTGCCTGAGCTTGATTTAGAAGAAGATGCACTGTATGCATTGAAGTTATCATTGAATGCTTCACCCAACCAGCTTACAAACTGGAACAGAAACCAAGTAACCCCTTGTACTTGGGCCAATGTTGAATGTGACCAGAATAACAATGTTGTTCGAGTTTCACTAGCATTTATGGGATTCACAGGATCCTTAACGCCGAGAATAGGGGCTCTAAAGAGTCTTAAAACTCTTTCTTTGCAAGGGAATAGCATCACCGGTGACATACCAAAAGAAATTGGAAATCTTACAAGCTTGGTTAGATTGGATTTGGAAAACAACAGATTGATGGGTGAAATACCATATTCCCTTGGTAATCTTAAAAAGCTTCAATTCTTGACATTGAGTCAAAACAATCTCACTGGAACTATTCCAAATTCACTTGCCAGTCTCCCAAGTTTGAGCAATATTCTACTAGATTCAAATAATCTTAGTGGGCAGATTCCGGAGCAGCTATTCAGCATTCCGGAGTACAATTTCACTGGAAATAATTTGAATTGTGGCGTGAACTATCATCGTCTTTGCACATCTGAGAATGCTGATCAAGGTGAAGTTGATCAGCGAATTACATTTGGTCAACTAAAAAGATTTGCCTGGAAAGAACTACAAATTGCTACAGACAACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAAGTTTATAAAGGTATTTTAGTTGATGGCACAAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGTCCTGGAGGTGAAAAAGCTTTCCATTGTGAAGTTGAGATGATAAGCGTAGCTGTCCATAGGAACCTGTTACGACTAATTGGTTTTTGTACTACTCCAACTGAACGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTATCGGCTACGAGAACTCAAACCTGGGGAACCTGTTTTAGATTGGCCTACTAGAAAACGAGTGGCTCTAGGAACAGCCCGTGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATTCATAGGGATGTGAAGGCAGCTAATATATTACTAGATGGAGATTTTGAAGCTGTTGTTGGGGACTTTGGTTTGGCAAAATTAGTTGATGTGCGAAATACTAATGTGACAACTCAAGTTCGTGGGACAATGGGCCATATAGCTCCGGAATACTTGTCCACTGGAAAATCTTCAGAAAGGACGGATGTTTTTGGCTATGGGATTATGCTTTTGGAGCTTGTTACAGGTCAACGAGCAATTGACTTTTCACGCTTGGAAGAGGAAGATGATGTGCTATTGCTTGACCATGTTAAGAAACTACAACGGGAGAAAAGACTAGATACTATTGTTGACTGCAACCTTAATAAAAATTACAGCATAGAAGAGGTTGAAATGATTGTACAAATTGCATTACTCTGCACACAAGCATCGCCCGAGGATCGTCCGGCAATGTCAGAAGTTGTAAGAATGCTGGAGGGCGAAGGGCTGGCTGAAAGATGGGAGGAATGGCAACATATGGAGGTCGCTACAAGGCAAGATTATGAGAGACTACAAAGAAGATTGGAATGGGGAGAAGATTCAGTTCATAACCAAGATGCCATTGAGTTGTCGGGTGGAAGATGA 1683 0.4052 MDLVSVLLLMSSICSFALPELDLEEDALYALKLSLNASPNQLTNWNRNQVTPCTWANVECDQNNNVVRVSLAFMGFTGSLTPRIGALKSLKTLSLQGNSITGDIPKEIGNLTSLVRLDLENNRLMGEIPYSLGNLKKLQFLTLSQNNLTGTIPNSLASLPSLSNILLDSNNLSGQIPEQLFSIPEYNFTGNNLNCGVNYHRLCTSENADQGEVDQRITFGQLKRFAWKELQIATDNFSEKNVLGQGGFGKVYKGILVDGTKVAVKRLTDYESPGGEKAFHCEVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEPVLDWPTRKRVALGTARGLEYLHEQCNPKIIHRDVKAANILLDGDFEAVVGDFGLAKLVDVRNTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLDTIVDCNLNKNYSIEEVEMIVQIALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHMEVATRQDYERLQRRLEWGEDSVHNQDAIELSGGR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2211 560 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Apr10g2211 560 SUPERFAMILY L domain-like 25 194 - -
Apr10g2211 560 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 3 211 - -
Apr10g2211 560 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 210 560 - -
Apr10g2211 560 SUPERFAMILY Protein kinase-like (PK-like) 216 512 IPR011009 -
Apr10g2211 560 PANTHER LRR RECEPTOR-LIKE KINASE 210 560 - -
Apr10g2211 560 PANTHER LRR RECEPTOR-LIKE KINASE 3 211 - -
Apr10g2211 560 SMART serkin_6 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2211 560 ProSiteProfiles Protein kinase domain profile. 237 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2211 560 Gene3D Transferase(Phosphotransferase) domain 1 314 531 - -
Apr10g2211 560 Pfam Protein kinase domain 238 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2211 560 Gene3D Ribonuclease Inhibitor 21 205 IPR032675 -
Apr10g2211 560 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Apr10g2211 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Apr10g2211 560 Gene3D Phosphorylase Kinase; domain 1 207 313 - -
Apr10g2211 560 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2211 Apr-Chr10 34528368 34534911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2211 1 560 Receptor kinase-like Gene Family AT5G10290 69.357 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Apr10g2211 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2211 - - gmx:100786654 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2211 10 34528368 34534911 Apr2g1718 2 22786052 22793170 PCT