Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2205 ATGTGCGGAATCCTCGCAGTTTTGGGTTGCGTCGACAACTCTCAGGCTAAGCGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGCCATAGAGGTCCTGATTGGAGTGGCATACATTGCCATGGGGATTGTTACCTTGCTCATCAACGATTGGCTATTGTTGATCCTACTTCAGGGGATCAACCTCTCTACAACGAAGACAAGACTGTTATTGTCACCGTGAACGGGGAGATATACAACCATAAGGAATTGAGACAGAAACTGAGTTCCCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAGCATGGAGAGGAGTTTGTTGATATGCTGGATGGGATGTTTGCCTTTGTCCTGCTTGATACTCGTGATAAAAGTTTTATTGCTGCTCGTGATTCTATTGGCATTACTCCTCTTTACTTGGGCTGGGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGAGTGATGATTGTGAGAGATTCATATCTTTTCCTCCTGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCATGGTTTGCAGAGCATATTCCATCAACTCCCTATGATCCAATGATTTTGCGAAAGACCTTTGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTACCATTTGGAGTTCTTTTATCCGGAGGACTGGACTCATCACTTGTTGCTGCTGTGGCCAATCGTTATTTGGCTGAATCTCCAGCCGCTCTTCAGTGGGGATCACGATTACATACTTTCTGCATTGGTTTAAAGGGCTCTCCGGATTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCTTCATCATGAACTTAATTTCACAGTTCAGGAAGGTCTAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTGACAACTATTAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAGATTAAAGCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATTTTTGGAGGTTACTTGTATTTCCATAAGGCACCTAACAAGGAAGAGTTTCACGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTGAGAGCTAATAAATCTACTGCAGCATGGGGTGTAGAGGCACGTGTACCGTTCTTGGATAAAGAATTTATCCATGTAGCCATGAGTATAGATCCAGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAAAAGTGGATATTGCGCAATGCTTTTGAAGATGCTAAGAATCCATATTTACCAAAACACATATTATACAGGCAGAAGGAACAGTTCAGCGATGGGGTCGGGTACGGCTGGATTGATGCCTTGAAGGATCATGCCAACCAACAAGTACCAGATGCAACTTTGTTGAATGCCAACTTTATTTACCCTGAAAATACCCCTACTACAAAAGAGGGATACTACTACAGGACAATCTTTGAGAAGTTCTTTCCAAAGAATGCAGCAAGGTCAACAGTTCCAGGAGGACCTAGTGTGGCATGCAGTACTGCCAAAGCTGTGGAATGGGATGCAGCATGGTCAAAAAATCCTGACCCTTCTGGTCGTGCCGCACTTGGTGTTCATGCAGCTGCATATGAGGATGCTTTAGCCGAGCCTAAAAAGGGAACCATAGTCTAG 1704 0.4308 MCGILAVLGCVDNSQAKRARIIELSRRLRHRGPDWSGIHCHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKELRQKLSSHQFRTGSDCEVIAHLYEEHGEEFVDMLDGMFAFVLLDTRDKSFIAARDSIGITPLYLGWGHDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFAEHIPSTPYDPMILRKTFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAESPAALQWGSRLHTFCIGLKGSPDLKAAKEVADYLGTLHHELNFTVQEGLDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFIHVAMSIDPEWKMIRPDLGRIEKWILRNAFEDAKNPYLPKHILYRQKEQFSDGVGYGWIDALKDHANQQVPDATLLNANFIYPENTPTTKEGYYYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEDALAEPKKGTIV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2205 567 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 367 IPR006426 GO:0004066|GO:0006529
Apr10g2205 567 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Apr10g2205 567 PANTHER ASPARAGINE SYNTHETASE 1 562 - -
Apr10g2205 567 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Apr10g2205 567 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Apr10g2205 567 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Apr10g2205 567 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 562 - -
Apr10g2205 567 PIRSF Asn_synthetase_glu-h 357 515 IPR006426 GO:0004066|GO:0006529
Apr10g2205 567 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Apr10g2205 567 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 208 484 - -
Apr10g2205 567 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Apr10g2205 567 Gene3D HUPs 195 514 IPR014729 -
Apr10g2205 567 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Apr10g2205 567 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2205 Apr-Chr10 34487141 34492236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2205 2 259 PRT Gene Family AT4G34740 26.814 1.96e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2205 K01953 - gmx:732660 1080.09